myRT

myRT report for GCA_003535575.1_ASM353557v1

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Seq: DQAF01000011.1 TPA_asm: Pseudomonas sp. isolate UBA11276 contig_174, whole genome shotgun sequence (46899 bp)
Overview 1 RT 1: 25065-30689 bp Neighborhood of RT #1 [25065, 30712] PRK11139 RVT-Retrons HTH_1 PBP2_CrgA_like_10 AraJ Feature: gene Location: 25065-25955 bp Feature: domain Description: PRK11139 Location: 25068-25944 bp Feature: domain Description: PRK1 1 1 39 Location: 25068-25944 bp Feature: gene Location: 26153-26314 bp Feature: gene Location: 26400-28109 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 26553-27150 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 26553-271 50 bp Feature: gene Location: 28558-29481 bp Feature: domain Description: HTH_1 Location: 28618-28786 bp Feature: domain Description: HTH_1 Location: 2861 8-28786 bp Feature: domain Description: PBP2_CrgA_like_10 Location: 28870-29461 bp Feature: domain Description: PBP2_CrgA_like_1 0 Location: 28870-29461 bp Feature: gene Location: 29546-30712 bp Feature: domain Description: AraJ Location: 29561-30689 bp Feature: domain Description: AraJ Location: 29561 -30689 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11139 (DNA-binding transcriptional activator GcvA; Provisional), RVT-Retrons, HTH_1 (pfam00126), PBP2_CrgA_like_10 (cd08480), AraJ (COG2814)

Seq: DQAF01000035.1 TPA_asm: Pseudomonas sp. isolate UBA11276 contig_219, whole genome shotgun sequence (149876 bp)
Overview 1 RT 1: 96460-101523 bp Neighborhood of RT #1 [96460, 101523] RVT-UG28 Feature: gene Location: 96460-97029 bp Feature: gene Location: 97080-98021 bp Feature: gene Location: 98808-100304 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 99093-99732 bp Feature: RT Description: RVT-UG2 8 Note: UG2 8 RT Location: 99093-99732 bp Feature: gene Location: 100496-100777 bp Feature: gene Location: 100963-101523 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG28