myRT

myRT report for GCA_003535635.1_ASM353563v1

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Seq: DPZV01000147.1 TPA_asm: Candidatus Accumulibacter sp. isolate UBA11070 contig_175, whole genome shotgun sequence (22063 bp)
Overview 1 RT 1: 19973-21902 bp Neighborhood of RT #1 [19973, 22060] Xcc1710_like CE4_ArnD RVT-GII GIIM Feature: gene Location: 19973-20344 bp Feature: domain Description: Xcc1710_like Location: 20012-20336 bp Feature: domain Description: Xcc1 71 0_like Location: 2001 2-20336 bp Feature: gene Location: 20363-21301 bp Feature: domain Description: CE4_ArnD Location: 20408-21239 bp Feature: domain Description: CE4_ArnD Location: 20408-21 239 bp Feature: gene Location: 21362-22060 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21404-21641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 404-21 641 bp Feature: domain Description: GIIM Note: maturase Location: 21704-21902 bp Feature: domain Description: GIIM Note: maturase Location: 21 704-21 902 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Xcc1710_like (cd05560), CE4_ArnD (cd10939), RVT-GII, GIIM (pfam08388)

Seq: DPZV01000159.1 TPA_asm: Candidatus Accumulibacter sp. isolate UBA11070 contig_1755, whole genome shotgun sequence (7599 bp)
Overview 1 RT 1: 4809-7597 bp Neighborhood of RT #1 [4809, 7596] Mtu_PIN_fam YccA_like RVT-GII Feature: gene Location: 4809-5246 bp Feature: domain Description: Mtu_PIN_fam Location: 4860-5220 bp Feature: domain Description: Mtu_PIN_fam Location: 4860-52 2 0 bp Feature: gene Location: 5755-6447 bp Feature: domain Description: YccA_like Location: 5809-6436 bp Feature: domain Description: YccA_like Location: 5809-6436 bp Feature: gene Location: 6871-7596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7213-7597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72 13-7597 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Mtu_PIN_fam (TIGR00028), YccA_like (cd10433), RVT-GII

Seq: DPZV01000080.1 TPA_asm: Candidatus Accumulibacter sp. isolate UBA11070 contig_3094, whole genome shotgun sequence (11722 bp)
Overview 1 RT 1: 4908-10533 bp Neighborhood of RT #1 [4908, 10676] YfmG Hrd RVT-DGRs YfmG YfmG Feature: gene Location: 4908-7829 bp Feature: domain Description: YfmG Location: 6996-7662 bp Feature: domain Description: YfmG Location: 6996-7662 bp Feature: gene Location: 7838-8344 bp Feature: domain Description: Hrd Location: 8078-8288 bp Feature: domain Description: Hrd Location: 8078-8288 bp Feature: gene Location: 8386-9399 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8593-9184 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8593 -9184 bp Feature: gene Location: 9396-9716 bp Feature: domain Description: YfmG Location: 9420-9582 bp Feature: domain Description: YfmG Location: 9420-9582 bp Feature: gene Location: 9729-10676 bp Feature: domain Description: YfmG Location: 9867-10533 bp Feature: domain Description: YfmG Location: 9867-1053 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), Hrd (LOAD_Hrd), RVT-DGRs