myRT

myRT report for GCA_003537015.1_ASM353701v1

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Seq: DPZG01000097.1 TPA_asm: Citrobacter freundii isolate UBA11315 contig_1104, whole genome shotgun sequence (38623 bp)
Overview 1 RT 1: 4615-13560 bp Neighborhood of RT #1 [4615, 13571] RVT-UG8 RVT-UG3 INT_Rci_Hp1_C INT_P4_C mutS1 Feature: gene Location: 4615-5061 bp Feature: gene Location: 5242-5871 bp Feature: gene Location: 6110-8128 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 6680-7130 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 6680-71 30 bp Feature: gene Location: 8125-9387 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 8407-8902 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 8407-8902 bp Feature: gene Location: 9384-10886 bp Feature: domain Description: INT_Rci_Hp1_C Location: 9801-10041 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 9801 -1 0041 bp Feature: domain Description: INT_P4_C Location: 10227-10764 bp Feature: domain Description: INT_P4_C Location: 1 0227-1 0764 bp Feature: gene Location: 11004-13571 bp Feature: domain Description: mutS1 Location: 11040-13560 bp Feature: domain Description: mutS1 Location: 1 1 040-1 3560 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8, RVT-UG3, INT_Rci_Hp1_C (cd00796), INT_P4_C (cd00801), mutS1 (TIGR01070)

Seq: DPZG01000100.1 TPA_asm: Citrobacter freundii isolate UBA11315 contig_785, whole genome shotgun sequence (65503 bp)
Overview 1 RT 1: 61973-65502 bp Neighborhood of RT #1 [61973, 65502] cpxP RVT-GII GIIM Feature: gene Location: 61973-62473 bp Feature: domain Description: cpxP Location: 61976-62471 bp Feature: domain Description: cpxP Location: 61976-62 471 bp Feature: gene Location: 62680-63039 bp Feature: gene Location: 63320-64843 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63593-64325 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63593-6432 5 bp Feature: domain Description: GIIM Note: maturase Location: 64400-64598 bp Feature: domain Description: GIIM Note: maturase Location: 64400-64598 bp Feature: gene Location: 65137-65502 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT cpxP (PRK12751), RVT-GII, GIIM (pfam08388)