myRT

myRT report for GCA_003537855.1_ASM353785v1

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Seq: DPQK01000018.1 TPA_asm: Curvibacter sp. isolate UBA10131 contig_2041, whole genome shotgun sequence (26039 bp)
Overview 1 RT 1: 119-4285 bp Neighborhood of RT #1 [119, 4392] Avd_like RVT-DGRs INT_Rci_Hp1_C Feature: gene Location: 119-607 bp Feature: gene Location: 665-1027 bp Feature: domain Description: Avd_like Location: 692-1001 bp Feature: domain Description: Avd_like Location: 692-1 001 bp Feature: gene Location: 1096-2406 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1495-2179 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 495-21 79 bp Feature: gene Location: 2854-3180 bp Feature: gene Location: 3397-4392 bp Feature: domain Description: INT_Rci_Hp1_C Location: 3856-4285 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 3856-4285 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, INT_Rci_Hp1_C (cd00796), Avd_like (cd16376)

Seq: DPQK01000011.1 TPA_asm: Curvibacter sp. isolate UBA10131 contig_39, whole genome shotgun sequence (446147 bp)
Overview 1 RT 1: 131503-138231 bp Neighborhood of RT #1 [131503, 138236] YpjD RVT_N RVT-GII GIIM HNHc PRK10867 PRK14325 Feature: gene Location: 131503-131727 bp Feature: gene Location: 131724-132500 bp Feature: domain Description: YpjD Location: 131772-132486 bp Feature: domain Description: YpjD Location: 131772 -132 486 bp Feature: gene Location: 132618-134372 bp Feature: RT Description: RVT_N Location: 132669-132909 bp Feature: RT Description: RVT_N Location: 132 669-132 909 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132957-133605 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132 957-133605 bp Feature: domain Description: GIIM Note: maturase Location: 133656-133890 bp Feature: domain Description: GIIM Note: maturase Location: 133656-133890 bp Feature: domain Description: HNHc Note: nucleases Location: 134103-134277 bp Feature: domain Description: HNHc Note: nucleases Location: 134103-1342 77 bp Feature: gene Location: 135423-136787 bp Feature: domain Description: PRK10867 Location: 135426-136752 bp Feature: domain Description: PRK10867 Location: 13542 6-136752 bp Feature: gene Location: 136911-138236 bp Feature: domain Description: PRK14325 Location: 136914-138231 bp Feature: domain Description: PRK1432 5 Location: 136914-1382 31 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YpjD (COG4137), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK10867 (signal recognition particle protein; Provisional), PRK14325 ((dimethylallyl)adenosine tRNA methylthiotransferase; Provisional)