myRT

myRT report for GCA_003537995.1_ASM353799v1

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Seq: DPPW01000279.1 TPA_asm: Clostridiales bacterium isolate UBA8693 contig_1683, whole genome shotgun sequence (13971 bp)
Overview 1 RT 1: 123-3712 bp Neighborhood of RT #1 [123, 3712] RVT-GII MATE_like_12 Feature: gene Location: 123-1460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 444-1104 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 444-1 1 04 bp Feature: gene Location: 2034-3395 bp Feature: domain Description: MATE_like_12 Location: 2058-3375 bp Feature: domain Description: MATE_like_1 2 Location: 2058-3375 bp Feature: gene Location: 3512-3712 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, MATE_like_12 (cd13142)

Seq: DPPW01000460.1 TPA_asm: Clostridiales bacterium isolate UBA8693 contig_2272, whole genome shotgun sequence (3708 bp)
Overview 1 RT 1: 3-2868 bp Neighborhood of RT #1 [3, 3707] RecQ RVT-UG5 Feature: gene Location: 3-1871 bp Feature: domain Description: RecQ Location: 180-576 bp Feature: domain Description: RecQ Location: 180-576 bp Feature: gene Location: 1908-3707 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2391-2868 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2 391-2 868 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RecQ (COG0514), RVT-UG5

Seq: DPPW01000311.1 TPA_asm: Clostridiales bacterium isolate UBA8693 contig_279, whole genome shotgun sequence (5321 bp)
Overview 1 RT 1: 2251-5148 bp Neighborhood of RT #1 [2251, 5150] Polbeta HEPN RVT-GII rpsI rplM Feature: gene Location: 2251-2571 bp Feature: domain Description: Polbeta Location: 2311-2566 bp Feature: domain Description: Polbeta Location: 23 11-2566 bp Feature: gene Location: 2541-2936 bp Feature: domain Description: HEPN Location: 2565-2898 bp Feature: domain Description: HEPN Location: 2565-2898 bp Feature: gene Location: 3208-3927 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3313-3829 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 13 -3 829 bp Feature: gene Location: 4311-4700 bp Feature: domain Description: rpsI Location: 4320-4698 bp Feature: domain Description: rpsI Location: 43 20-4698 bp Feature: gene Location: 4719-5150 bp Feature: domain Description: rplM Location: 4725-5148 bp Feature: domain Description: rplM Location: 4725-5148 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Polbeta (pfam18765), HEPN (smart00748), RVT-GII, rpsI (PRK00132), rplM (PRK09216)

Seq: DPPW01000005.1 TPA_asm: Clostridiales bacterium isolate UBA8693 contig_3853, whole genome shotgun sequence (3627 bp)
Overview 1 RT 1: 351-3431 bp Neighborhood of RT #1 [351, 3499] FIDO VOC_like RVT-GII GIIM Feature: gene Location: 351-929 bp Feature: domain Description: FIDO Location: 363-867 bp Feature: domain Description: FIDO Location: 363-867 bp Feature: gene Location: 961-1302 bp Feature: domain Description: VOC_like Location: 976-1291 bp Feature: domain Description: VOC_like Location: 976-1291 bp Feature: gene Location: 2147-3499 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2450-3140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24 50-314 0 bp Feature: domain Description: GIIM Note: maturase Location: 3227-3431 bp Feature: domain Description: GIIM Note: maturase Location: 3227-34 31 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FIDO (COG2184), VOC_like (cd16355), RVT-GII, GIIM (pfam08388)