myRT

myRT report for GCA_003539375.1_ASM353937v1

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Seq: DPPH01000010.1 TPA_asm: Clostridiales bacterium isolate UBA8670 contig_1387, whole genome shotgun sequence (13058 bp)
Overview 1 RT 1: 6116-11024 bp Neighborhood of RT #1 [6116, 11044] Cys_rich_KTR RVT-GII GIIM DUF2680 TIGR00275 Feature: gene Location: 6116-6289 bp Feature: domain Description: Cys_rich_KTR Location: 6131-6287 bp Feature: domain Description: Cys_rich_KTR Location: 61 31 -6287 bp Feature: gene Location: 6475-7077 bp Feature: gene Location: 7739-9004 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7952-8573 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7952-8573 bp Feature: domain Description: GIIM Note: maturase Location: 8615-8846 bp Feature: domain Description: GIIM Note: maturase Location: 861 5-8846 bp Feature: gene Location: 9183-9650 bp Feature: domain Description: DUF2680 Location: 9462-9579 bp Feature: domain Description: DUF2680 Location: 9462-9579 bp Feature: gene Location: 9815-11044 bp Feature: domain Description: TIGR00275 Location: 9836-11024 bp Feature: domain Description: TIGR00275 Location: 9836-1 1 024 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cys_rich_KTR (pfam14205), RVT-GII, GIIM (pfam08388), DUF2680 (pfam10925), TIGR00275 (flavoprotein, HI0933 family)

Seq: DPPH01000230.1 TPA_asm: Clostridiales bacterium isolate UBA8670 contig_7014, whole genome shotgun sequence (6107 bp)
Overview 1 RT 1: 80-4247 bp Neighborhood of RT #1 [80, 4270] RVT-GII GIIM D-HYD CSHase Feature: gene Location: 80-1588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 548-1226 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 548-12 2 6 bp Feature: domain Description: GIIM Note: maturase Location: 1289-1502 bp Feature: domain Description: GIIM Note: maturase Location: 12 89-1502 bp Feature: gene Location: 2210-3580 bp Feature: domain Description: D-HYD Location: 2228-3557 bp Feature: domain Description: D-HYD Location: 2 2 2 8-3557 bp Feature: gene Location: 3584-4270 bp Feature: domain Description: CSHase Location: 3791-4247 bp Feature: domain Description: CSHase Location: 3791-42 47 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT D-HYD (cd01314), CSHase (cd01015), RVT-GII, GIIM (pfam08388)