myRT

myRT report for GCA_003541615.1_ASM354161v1

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Seq: DPMF01000094.1 TPA_asm: Zunongwangia profunda isolate UBA9359 contig_33551, whole genome shotgun sequence (11209 bp)
Overview 1 RT 1: 180-3928 bp Neighborhood of RT #1 [180, 3957] DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII GIIM LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 TnpB_IS66 Feature: gene Location: 180-953 bp Feature: domain Description: DDE_Tnp_IS66 Location: 192-795 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 92-795 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 825-924 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 825-924 bp Feature: gene Location: 1059-2297 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1272-1926 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 272-1 926 bp Feature: domain Description: GIIM Note: maturase Location: 2004-2223 bp Feature: domain Description: GIIM Note: maturase Location: 2004-2223 bp Feature: gene Location: 2809-3594 bp Feature: domain Description: LZ_Tnp_IS66 Location: 2953-3175 bp Feature: domain Description: LZ_Tnp_IS66 Location: 2953-31 75 bp Feature: domain Description: zf-IS66 Location: 3205-3295 bp Feature: domain Description: zf-IS66 Location: 3205-3295 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3352-3577 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3352-3577 bp Feature: gene Location: 3670-3957 bp Feature: domain Description: TnpB_IS66 Location: 3673-3928 bp Feature: domain Description: TnpB_IS66 Location: 3673-3928 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), TnpB_IS66 (pfam05717)