myRT

myRT report for GCA_003542695.1_ASM354269v1

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Seq: DPKD01000027.1 TPA_asm: Odoribacter splanchnicus isolate UBA11779 contig_702, whole genome shotgun sequence (138699 bp)
Overview 1 RT 1: 30293-37627 bp Neighborhood of RT #1 [30293, 37920] Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-GII TlpA_like_family PdaC Feature: gene Location: 30293-32380 bp Feature: gene Location: 32745-33995 bp Feature: domain Description: Arm-DNA-bind_5 Location: 32859-33111 bp Feature: domain Description: Arm-DNA-bind_5 Location: 32859-331 1 1 bp Feature: domain Description: Phage_int_SAM_5 Location: 33153-33465 bp Feature: domain Description: Phage_int_SAM_5 Location: 331 53-33465 bp Feature: domain Description: INTN1_C_like Location: 33513-33978 bp Feature: domain Description: INTN1 _C_like Location: 3351 3-33978 bp Feature: gene Location: 34546-35712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34810-35569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3481 0-35569 bp Feature: gene Location: 35735-37135 bp Feature: domain Description: TlpA_like_family Location: 36722-37067 bp Feature: domain Description: TlpA_like_family Location: 36722-37067 bp Feature: gene Location: 37234-37920 bp Feature: domain Description: PdaC Location: 37336-37627 bp Feature: domain Description: PdaC Location: 37336-37627 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), RVT-GII, TlpA_like_family (cd02966), PdaC