myRT

myRT report for GCA_003542815.1_ASM354281v1

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Seq: DPJX01000388.1 TPA_asm: Sphingobacterium sp. isolate UBA11296 contig_5105, whole genome shotgun sequence (16705 bp)
Overview 1 RT 1: 2-7901 bp Neighborhood of RT #1 [2, 9196] COG2865 Glyco_hydro_20b NAGidase RVT-UG2 RVT-UG2 YjbM YjbM NACHT Feature: gene Location: 2-1114 bp Feature: domain Description: COG2865 Location: 29-1115 bp Feature: domain Description: COG2865 Location: 29-1 1 1 5 bp Feature: gene Location: 1819-3825 bp Feature: domain Description: Glyco_hydro_20b Location: 1972-2392 bp Feature: domain Description: Glyco_hydro_20b Location: 1 972-2392 bp Feature: domain Description: NAGidase Location: 2410-3340 bp Feature: domain Description: NAGidase Location: 241 0-3340 bp Feature: gene Location: 4241-4738 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 4250-4397 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 4250-4397 bp Feature: gene Location: 4747-5757 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 4999-5707 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 4999-5707 bp Feature: gene Location: 6132-7031 bp Feature: domain Description: YjbM Location: 6222-6375 bp Feature: domain Description: YjbM Location: 6222-6375 bp Feature: domain Description: YjbM Location: 6528-6708 bp Feature: domain Description: YjbM Location: 6528-6708 bp Feature: gene Location: 7034-9196 bp Feature: domain Description: NACHT Location: 7523-7901 bp Feature: domain Description: NACHT Location: 7523-7901 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2865 (Predicted transcriptional regulator, contains HTH domain ), Glyco_hydro_20b (pfam02838), NAGidase (pfam07555), RVT-UG2, YjbM (COG2357), NACHT (pfam05729)