myRT

myRT report for GCA_003542935.1_ASM354293v1

Download annotations/find similar RTs

Seq: DPJQ01000171.1 TPA_asm: Lachnospiraceae bacterium isolate UBA11957 contig_69772, whole genome shotgun sequence (7789 bp)
Overview 1 RT 1: 2-6262 bp Neighborhood of RT #1 [2, 6366] DUF820 HAD_5-3dNT RVT-CRISPR COG4951 Cas_Cas1 Csx1_III-U Feature: gene Location: 2-337 bp Feature: domain Description: DUF820 Location: 14-239 bp Feature: domain Description: DUF820 Location: 1 4-239 bp Feature: gene Location: 357-632 bp Feature: domain Description: HAD_5-3dNT Location: 375-570 bp Feature: domain Description: HAD_5-3dNT Location: 375-570 bp Feature: gene Location: 661-3498 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 871-1471 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 871 -1 471 bp Feature: domain Description: COG4951 Location: 2212-2761 bp Feature: domain Description: COG4951 Location: 221 2-2761 bp Feature: gene Location: 3773-4771 bp Feature: domain Description: Cas_Cas1 Location: 3785-4628 bp Feature: domain Description: Cas_Cas1 Location: 3785-4628 bp Feature: gene Location: 4771-6366 bp Feature: domain Description: Csx1_III-U Location: 5008-6262 bp Feature: domain Description: Csx1 _III-U Location: 5008-6262 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF820, HAD_5-3dNT (cd02587), RVT-CRISPR, COG4951 (Uncharacterized protein ), Cas_Cas1 (pfam01867), Csx1_III-U (cl21570)