myRT

myRT report for GCA_003543015.1_ASM354301v1

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Seq: DPJM01000113.1 TPA_asm: Micromonosporaceae bacterium isolate UBA11054 contig_182, whole genome shotgun sequence (32302 bp)
Overview 1 RT 1: 12425-16013 bp Neighborhood of RT #1 [12425, 16099] RVT-GII GIIM APH Flavoprotein Acetyltransf_1 Feature: gene Location: 12425-13204 bp Feature: gene Location: 13272-13607 bp Feature: gene Location: 13680-13979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13686-13755 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3686-1 3755 bp Feature: domain Description: GIIM Note: maturase Location: 13827-13971 bp Feature: domain Description: GIIM Note: maturase Location: 1 3827-1 3971 bp Feature: gene Location: 14061-15041 bp Feature: domain Description: APH Location: 14247-14814 bp Feature: domain Description: APH Location: 1 4247-1 481 4 bp Feature: gene Location: 15038-16099 bp Feature: domain Description: Flavoprotein Location: 15092-15512 bp Feature: domain Description: Flavoprotein Location: 1 5092-1 551 2 bp Feature: domain Description: Acetyltransf_1 Location: 15743-16013 bp Feature: domain Description: Acetyltransf_1 Location: 1 5743-1 601 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), APH (pfam01636), Flavoprotein (pfam02441), Acetyltransf_1 (pfam00583)

Seq: DPJM01000292.1 TPA_asm: Micromonosporaceae bacterium isolate UBA11054 contig_2178, whole genome shotgun sequence (5968 bp)
Overview 1 RT 1: 93-3861 bp Neighborhood of RT #1 [93, 3872] PHA02517 RVT-GII GIIM InsE Feature: gene Location: 93-254 bp Feature: gene Location: 434-1357 bp Feature: domain Description: PHA02517 Location: 518-1325 bp Feature: domain Description: PHA02 517 Location: 518-132 5 bp Feature: gene Location: 1512-2966 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1854-2544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1854-2 544 bp Feature: domain Description: GIIM Note: maturase Location: 2616-2832 bp Feature: domain Description: GIIM Note: maturase Location: 2 616-2 832 bp Feature: gene Location: 3180-3470 bp Feature: gene Location: 3558-3872 bp Feature: domain Description: InsE Location: 3567-3861 bp Feature: domain Description: InsE Location: 3567-3861 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed)

Seq: DPJM01000609.1 TPA_asm: Micromonosporaceae bacterium isolate UBA11054 contig_565, whole genome shotgun sequence (6261 bp)
Overview 1 RT 1: 290-3097 bp Neighborhood of RT #1 [290, 3246] RVT-GII GIIM DEDD_Tnp_IS110 Transposase_20 Feature: gene Location: 290-1915 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 806-1493 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 806-1493 bp Feature: domain Description: GIIM Note: maturase Location: 1565-1793 bp Feature: domain Description: GIIM Note: maturase Location: 1565-1793 bp Feature: gene Location: 1952-2137 bp Feature: gene Location: 2149-3246 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 2188-2518 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 2188-2518 bp Feature: domain Description: Transposase_20 Location: 2845-3097 bp Feature: domain Description: Transposase_20 Location: 2845-3 097 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEDD_Tnp_IS110 (pfam01548), Transposase_20 (pfam02371), RVT-GII, GIIM (pfam08388)

Seq: DPJM01000679.1 TPA_asm: Micromonosporaceae bacterium isolate UBA11054 contig_6077, whole genome shotgun sequence (3227 bp)
Overview 1 RT 1: 144-3182 bp Neighborhood of RT #1 [144, 3226] RVT-GII RVT-GII GIIM Feature: gene Location: 144-371 bp Feature: gene Location: 559-1452 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 880-1420 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 880-14 20 bp Feature: gene Location: 2009-3226 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2225-2882 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2225-2882 bp Feature: domain Description: GIIM Note: maturase Location: 2960-3182 bp Feature: domain Description: GIIM Note: maturase Location: 2960-3182 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)