myRT

myRT report for GCA_003543615.1_ASM354361v1

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Seq: DNAC01000267.1 TPA_asm: Eubacterium sp. isolate UBA9420 contig_129366, whole genome shotgun sequence (10137 bp)
Overview 1 RT 1: 1-4575 bp Neighborhood of RT #1 [1, 6086] LysU metG_C_term RVT-UG26 Big_2 Big_2 Feature: gene Location: 1-765 bp Feature: domain Description: LysU Location: 4-307 bp Feature: domain Description: LysU Location: 4-307 bp Feature: domain Description: metG_C_term Location: 418-757 bp Feature: domain Description: metG_C_term Location: 41 8-757 bp Feature: gene Location: 890-1573 bp Feature: gene Location: 1774-2988 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 1972-2587 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 1 972-2587 bp Feature: gene Location: 3137-3511 bp Feature: gene Location: 3999-6086 bp Feature: domain Description: Big_2 Location: 4131-4320 bp Feature: domain Description: Big_2 Location: 41 31 -4320 bp Feature: domain Description: Big_2 Location: 4350-4575 bp Feature: domain Description: Big_2 Location: 4350-4575 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysU (COG1190), metG_C_term (TIGR00399), RVT-UG26, Big_2 (pfam02368)

Seq: DNAC01000108.1 TPA_asm: Eubacterium sp. isolate UBA9420 contig_6633, whole genome shotgun sequence (14144 bp)
Overview 1 RT 1: 7464-13436 bp Neighborhood of RT #1 [7464, 13531] Peptidases_S8_C5a_Peptidase Peptidases_S8_C5a_Peptidase fn3_5 RVT-GII Nudix_Hydrolase_34 Hydrolase_3 Feature: gene Location: 7464-7646 bp Feature: gene Location: 7522-11835 bp Feature: domain Description: Peptidases_S8_C5a_Peptidase Location: 7960-8629 bp Feature: domain Description: Peptidases_S8_C5a_Peptidase Location: 7960-862 9 bp Feature: domain Description: Peptidases_S8_C5a_Peptidase Location: 8650-8995 bp Feature: domain Description: Peptidases_S8_C5a_Peptidase Location: 8650-8995 bp Feature: domain Description: fn3_5 Location: 9037-9361 bp Feature: domain Description: fn3_5 Location: 9037-9361 bp Feature: gene Location: 12010-12276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12052-12199 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 052 -12 199 bp Feature: gene Location: 12383-12880 bp Feature: gene Location: 12926-13531 bp Feature: domain Description: Nudix_Hydrolase_34 Location: 13034-13193 bp Feature: domain Description: Nudix_Hydrolase_34 Location: 13034-13193 bp Feature: domain Description: Hydrolase_3 Location: 13316-13436 bp Feature: domain Description: Hydrolase_3 Location: 13316-13436 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidases_S8_C5a_Peptidase (cd07475), fn3_5 (pfam06280), RVT-GII, Nudix_Hydrolase_34 (cd04693), Hydrolase_3 (pfam08282)