myRT

myRT report for GCA_003543735.1_ASM354373v1

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Seq: DNAW01000051.1 TPA_asm: Treponema sp. isolate UBA12279 contig_4407, whole genome shotgun sequence (8018 bp)
Overview 1 RT 1: 872-5665 bp Neighborhood of RT #1 [872, 5679] HNH_4 CsgG DUF1566 RVT-DGRs Avd_like CsgG DUF1566 Feature: gene Location: 872-1846 bp Feature: domain Description: HNH_4 Location: 1571-1709 bp Feature: domain Description: HNH_4 Location: 1 571 -1 709 bp Feature: gene Location: 2084-2905 bp Feature: domain Description: CsgG Location: 2204-2399 bp Feature: domain Description: CsgG Location: 2204-2399 bp Feature: gene Location: 2902-4476 bp Feature: domain Description: DUF1566 Location: 3076-3205 bp Feature: domain Description: DUF1 566 Location: 3076-3205 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3499-4195 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3499-41 95 bp Feature: gene Location: 4430-4777 bp Feature: domain Description: Avd_like Location: 4457-4763 bp Feature: domain Description: Avd_like Location: 4457-4763 bp Feature: gene Location: 4807-5679 bp Feature: domain Description: CsgG Location: 4984-5191 bp Feature: domain Description: CsgG Location: 4984-51 91 bp Feature: domain Description: DUF1566 Location: 5410-5665 bp Feature: domain Description: DUF1 566 Location: 541 0-5665 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CsgG (pfam03783), DUF1566 (pfam07603), RVT-DGRs, Avd_like (cd16376), HNH_4 (pfam13395)