myRT

myRT report for GCA_003545355.1_ASM354535v1

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Seq: DPYQ01000036.1 TPA_asm: Psychrobacter sp. isolate UBA10709 contig_262, whole genome shotgun sequence (89060 bp)
Overview 1 RT 1: 27379-31269 bp Neighborhood of RT #1 [27379, 31274] HTH_XRE RVT-Retrons tdh 2am3keto_CoA Feature: gene Location: 27379-27561 bp Feature: gene Location: 27585-27911 bp Feature: domain Description: HTH_XRE Location: 27612-27774 bp Feature: domain Description: HTH_XRE Location: 2761 2-27774 bp Feature: gene Location: 27880-28839 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 28057-28585 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 28057-28585 bp Feature: gene Location: 28951-29976 bp Feature: domain Description: tdh Location: 28954-29974 bp Feature: domain Description: tdh Location: 28954-29974 bp Feature: gene Location: 30042-31274 bp Feature: domain Description: 2am3keto_CoA Location: 30099-31269 bp Feature: domain Description: 2am3keto_CoA Location: 30099-31 269 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, tdh (TIGR00692), 2am3keto_CoA (TIGR01822)

Seq: DPYQ01000003.1 TPA_asm: Psychrobacter sp. isolate UBA10709 contig_905, whole genome shotgun sequence (77739 bp)
Overview 1 RT 1: 16620-24628 bp Neighborhood of RT #1 [16620, 24636] guaA COG3837 RVT-UG8 RVT-UG3 PRK06563 RhtB Feature: gene Location: 16620-18224 bp Feature: domain Description: guaA Location: 16647-18222 bp Feature: domain Description: guaA Location: 16647-182 2 2 bp Feature: gene Location: 18489-18983 bp Feature: domain Description: COG3837 Location: 18549-18933 bp Feature: domain Description: COG3837 Location: 18549-18933 bp Feature: gene Location: 19475-21493 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 20054-20501 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 2 0054-2 0501 bp Feature: gene Location: 21494-22801 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 21830-22307 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 2 1830-2 2 307 bp Feature: gene Location: 22858-23661 bp Feature: domain Description: PRK06563 Location: 22897-23659 bp Feature: domain Description: PRK06563 Location: 2 2 897-2 3659 bp Feature: gene Location: 23851-24636 bp Feature: domain Description: RhtB Location: 23938-24628 bp Feature: domain Description: RhtB Location: 2 3938-2 462 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT guaA (PRK00074), COG3837 (Uncharacterized conserved protein, cupin superfamily ), RVT-UG8, RVT-UG3, PRK06563 (crotonase/enoyl-CoA hydratase family protein), RhtB (COG1280)