myRT

myRT report for GCA_003550805.1_ASM355080v1

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Seq: PULD01000094.1 Cyanobacteria bacterium B1Sed10_56 B1-Sed10-C26060, whole genome shotgun sequence (5211 bp)
Overview 1 RT 1: 1-4062 bp Neighborhood of RT #1 [1, 4079] RVT-DGRs Avd_like YfmG Feature: gene Location: 1-1026 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 214-853 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 21 4-853 bp Feature: gene Location: 1029-1385 bp Feature: domain Description: Avd_like Location: 1050-1356 bp Feature: domain Description: Avd_like Location: 1 050-1 356 bp Feature: gene Location: 1455-4079 bp Feature: domain Description: YfmG Location: 3294-4062 bp Feature: domain Description: YfmG Location: 3294-4062 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), YfmG (COG1262)

Seq: PULD01000282.1 Cyanobacteria bacterium B1Sed10_56 B1-Sed10-C2878, whole genome shotgun sequence (19504 bp)
Overview 1 RT 1: 13072-18607 bp Neighborhood of RT #1 [13072, 18762] COG5421 COG3464 RVT_N RVT-GII YkfC McrA DUF4277 Sulfotransfer_3 Sulfotransfer_3 Feature: gene Location: 13072-14664 bp Feature: domain Description: COG5421 Location: 13087-14572 bp Feature: domain Description: COG542 1 Location: 13087-14572 bp Feature: gene Location: 14697-15461 bp Feature: domain Description: COG3464 Location: 14775-15405 bp Feature: domain Description: COG3464 Location: 14775-15405 bp Feature: gene Location: 15376-17160 bp Feature: domain Description: RVT_N Location: 15559-15727 bp Feature: domain Description: RVT_N Location: 15559-1572 7 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15769-16408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15769-16408 bp Feature: domain Description: YkfC Location: 16579-16768 bp Feature: domain Description: YkfC Location: 16579-16768 bp Feature: domain Description: McrA Location: 16822-17101 bp Feature: domain Description: McrA Location: 1682 2 -17101 bp Feature: gene Location: 17396-17809 bp Feature: domain Description: DUF4277 Location: 17402-17636 bp Feature: domain Description: DUF42 77 Location: 17402 -17636 bp Feature: gene Location: 17995-18762 bp Feature: domain Description: Sulfotransfer_3 Location: 18010-18130 bp Feature: domain Description: Sulfotransfer_3 Location: 18010-18130 bp Feature: domain Description: Sulfotransfer_3 Location: 18250-18607 bp Feature: domain Description: Sulfotransfer_3 Location: 182 50-18607 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5421 (Transposase ), COG3464 (Transposase ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), McrA (COG4058), DUF4277 (pfam14104), Sulfotransfer_3 (pfam13469)

Seq: PULD01000089.1 Cyanobacteria bacterium B1Sed10_56 B1-Sed10-C29595, whole genome shotgun sequence (4784 bp)
Overview 1 RT 1: 155-2888 bp Neighborhood of RT #1 [155, 2926] RVT-CRISPR Cas1_I-II-III 23S_rRNA_IVP Cas2_I_II_III Feature: gene Location: 155-2128 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 344-953 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 3 44-953 bp Feature: domain Description: Cas1_I-II-III Location: 1133-2090 bp Feature: domain Description: Cas1_I-II-III Location: 113 3 -2090 bp Feature: gene Location: 2160-2555 bp Feature: domain Description: 23S_rRNA_IVP Location: 2193-2505 bp Feature: domain Description: 23 S_rRNA_IVP Location: 2193 -2505 bp Feature: gene Location: 2648-2926 bp Feature: domain Description: Cas2_I_II_III Location: 2657-2888 bp Feature: domain Description: Cas2_I_II_III Location: 2657-2888 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas1_I-II-III (cl00656), 23S_rRNA_IVP (pfam05635), Cas2_I_II_III (cl11442)

Seq: PULD01000143.1 Cyanobacteria bacterium B1Sed10_56 B1-Sed10-C29722, whole genome shotgun sequence (4769 bp)
Overview 1 RT 1: 3-3234 bp Neighborhood of RT #1 [3, 3254] YfmG Avd_like RVT-DGRs YfmG Feature: gene Location: 3-536 bp Feature: domain Description: YfmG Location: 6-501 bp Feature: domain Description: YfmG Location: 6-501 bp Feature: gene Location: 633-992 bp Feature: domain Description: Avd_like Location: 651-957 bp Feature: domain Description: Avd_like Location: 651-957 bp Feature: gene Location: 976-2112 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1186-1825 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1186-1825 bp Feature: gene Location: 2120-2356 bp Feature: gene Location: 2433-3254 bp Feature: domain Description: YfmG Location: 2520-3234 bp Feature: domain Description: YfmG Location: 2520-3234 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), Avd_like (cd16376), RVT-DGRs

Seq: PULD01000330.1 Cyanobacteria bacterium B1Sed10_56 B1-Sed10-C403, whole genome shotgun sequence (48668 bp)
Overview 1 RT 1: 17200-20436 bp Neighborhood of RT #1 [17200, 20483] Avd_like RVT-DGRs YfmG GT4_PimA-like Feature: gene Location: 17200-17409 bp Feature: gene Location: 17516-17899 bp Feature: domain Description: Avd_like Location: 17534-17840 bp Feature: domain Description: Avd_like Location: 175 34-17840 bp Feature: gene Location: 17914-18978 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 18124-18763 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 18124-18763 bp Feature: gene Location: 18998-19165 bp Feature: domain Description: YfmG Location: 19001-19109 bp Feature: domain Description: YfmG Location: 19001-19109 bp Feature: gene Location: 19323-20483 bp Feature: domain Description: GT4_PimA-like Location: 19329-20436 bp Feature: domain Description: GT4_PimA-like Location: 19329-20436 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, YfmG (COG1262), GT4_PimA-like (cd03801)

Seq: PULD01000157.1 Cyanobacteria bacterium B1Sed10_56 B1-Sed10-C42641, whole genome shotgun sequence (3700 bp)
Overview 1 RT 1: 470-3381 bp Neighborhood of RT #1 [470, 3419] Cas2_I_II_III 23S_rRNA_IVP RVT-CRISPR Cas1_I-II-III Feature: gene Location: 470-748 bp Feature: domain Description: Cas2_I_II_III Location: 479-710 bp Feature: domain Description: Cas2_I_II_III Location: 479-710 bp Feature: gene Location: 835-1203 bp Feature: domain Description: 23S_rRNA_IVP Location: 850-1165 bp Feature: domain Description: 23S_rRNA_IVP Location: 850-116 5 bp Feature: gene Location: 1446-3419 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1635-2244 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 16 35-2244 bp Feature: domain Description: Cas1_I-II-III Location: 2424-3381 bp Feature: domain Description: Cas1_I-II-III Location: 2424-3381 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), 23S_rRNA_IVP (pfam05635), RVT-CRISPR, Cas1_I-II-III (cl00656)

Seq: PULD01000135.1 Cyanobacteria bacterium B1Sed10_56 B1-Sed10-C64823, whole genome shotgun sequence (2747 bp)
Overview 1 RT 1: 2-2730 bp Neighborhood of RT #1 [2, 2744] YfmG RVT-DGRs Avd_like YfmG Feature: gene Location: 2-625 bp Feature: domain Description: YfmG Location: 107-623 bp Feature: domain Description: YfmG Location: 107 -623 bp Feature: gene Location: 933-2018 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1146-1785 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1146-17 85 bp Feature: gene Location: 2021-2377 bp Feature: domain Description: Avd_like Location: 2042-2348 bp Feature: domain Description: Avd_like Location: 2042-2348 bp Feature: gene Location: 2451-2744 bp Feature: domain Description: YfmG Location: 2454-2730 bp Feature: domain Description: YfmG Location: 2454-27 30 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), RVT-DGRs, Avd_like (cd16376)