myRT

myRT report for GCA_003550845.1_ASM355084v1

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Seq: PULF01000005.1 Planctomycetaceae bacterium isolate B1Sed10_54 B1-Sed10-C12661, whole genome shotgun sequence (8395 bp)
Overview 1 RT 1: 403-3198 bp Neighborhood of RT #1 [403, 3215] RVT-GII GIIM CopG_antitoxin Feature: gene Location: 403-825 bp Feature: gene Location: 911-2350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1277-1898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 277-1 898 bp Feature: domain Description: GIIM Note: maturase Location: 1943-2150 bp Feature: domain Description: GIIM Note: maturase Location: 1 943-21 50 bp Feature: gene Location: 2644-2793 bp Feature: gene Location: 2952-3215 bp Feature: domain Description: CopG_antitoxin Location: 2979-3198 bp Feature: domain Description: CopG_antitoxin Location: 2979-31 98 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), CopG_antitoxin (pfam12441)

Seq: PULF01000161.1 Planctomycetaceae bacterium isolate B1Sed10_54 B1-Sed10-C20752, whole genome shotgun sequence (6072 bp)
Overview 1 RT 1: 3-5425 bp Neighborhood of RT #1 [3, 5688] RVT-CRISPR-like MviM CmuA_CmuC_like Feature: gene Location: 3-1310 bp Feature: gene Location: 1312-2514 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1606-2170 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1606-2 170 bp Feature: gene Location: 2891-4201 bp Feature: domain Description: MviM Location: 3023-3863 bp Feature: domain Description: MviM Location: 302 3-3863 bp Feature: gene Location: 4246-5688 bp Feature: domain Description: CmuA_CmuC_like Location: 4267-5425 bp Feature: domain Description: CmuA_CmuC_like Location: 42 67-542 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, MviM (COG0673), CmuA_CmuC_like (cd03308)

Seq: PULF01000555.1 Planctomycetaceae bacterium isolate B1Sed10_54 B1-Sed10-C26624, whole genome shotgun sequence (5139 bp)
Overview 1 RT 1: 2-4530 bp Neighborhood of RT #1 [2, 4530] STKc_PknB_like PDC1_DGC_like Axe1 PldB Hydrolase_4 RVT-Retrons Feature: gene Location: 2-1705 bp Feature: domain Description: STKc_PknB_like Location: 8-419 bp Feature: domain Description: STKc_PknB_like Location: 8-419 bp Feature: domain Description: PDC1_DGC_like Location: 803-1163 bp Feature: domain Description: PDC1_DGC_like Location: 803 -1163 bp Feature: gene Location: 1796-3847 bp Feature: domain Description: Axe1 Location: 2168-2639 bp Feature: domain Description: Axe1 Location: 2168-263 9 bp Feature: domain Description: PldB Location: 2747-2891 bp Feature: domain Description: PldB Location: 2747-2891 bp Feature: domain Description: Hydrolase_4 Location: 3311-3464 bp Feature: domain Description: Hydrolase_4 Location: 3 3 11-3 464 bp Feature: gene Location: 3847-4443 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3853-4234 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 853 -423 4 bp Feature: gene Location: 3979-4530 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT STKc_PknB_like (cd14014), PDC1_DGC_like (cd12914), Axe1 (COG3458), PldB (COG2267), Hydrolase_4 (pfam12146), RVT-Retrons

Seq: PULF01000453.1 Planctomycetaceae bacterium isolate B1Sed10_54 B1-Sed10-C33854, whole genome shotgun sequence (4357 bp)
Overview 1 RT 1: 1-2358 bp Neighborhood of RT #1 [1, 2358] RVT-Retrons N6_N4_Mtase Feature: gene Location: 1-606 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31-316 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31-316 bp Feature: gene Location: 638-1354 bp Feature: domain Description: N6_N4_Mtase Location: 665-1331 bp Feature: domain Description: N6_N4 _Mtase Location: 665-1331 bp Feature: gene Location: 1351-2358 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, N6_N4_Mtase (pfam01555)

Seq: PULF01000690.1 Planctomycetaceae bacterium isolate B1Sed10_54 B1-Sed10-C68393, whole genome shotgun sequence (2644 bp)
Overview 1 RT 1: 1-2644 bp Neighborhood of RT #1 [1, 2643] HRDC RVT-DGRs YfmG Feature: gene Location: 1-591 bp Feature: domain Description: HRDC Location: 343-532 bp Feature: domain Description: HRDC Location: 343-5 32 bp Feature: gene Location: 566-1888 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 773-1358 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 773-135 8 bp Feature: gene Location: 1978-2643 bp Feature: domain Description: YfmG Location: 2008-2644 bp Feature: domain Description: YfmG Location: 2008-2644 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HRDC (smart00341), RVT-DGRs, YfmG (COG1262)

Seq: PULF01000098.1 Planctomycetaceae bacterium isolate B1Sed10_54 B1-Sed10-C72946, whole genome shotgun sequence (2529 bp)
Overview 1 RT 1: 2-2344 bp Neighborhood of RT #1 [2, 2526] INT_ICEBs1_C_like RVT-GII GIIM Feature: gene Location: 2-445 bp Feature: domain Description: INT_ICEBs1_C_like Location: 17-347 bp Feature: domain Description: INT_ICEBs1_C_like Location: 17-347 bp Feature: gene Location: 1099-2526 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1456-2071 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1456 -2071 bp Feature: domain Description: GIIM Note: maturase Location: 2119-2344 bp Feature: domain Description: GIIM Note: maturase Location: 2119-2344 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_ICEBs1_C_like (cd01189), RVT-GII, GIIM (pfam08388)