myRT

myRT report for GCA_003550965.1_ASM355096v1

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Seq: PULP01000067.1 Halobacteroidaceae bacterium isolate B1Sed10_43 B1-Sed10-C36959, whole genome shotgun sequence (4097 bp)
Overview 1 RT 1: 1-3732 bp Neighborhood of RT #1 [1, 3732] L1-EN xth RVT-GII Feature: gene Location: 1-2088 bp Feature: domain Description: L1-EN Location: 10-439 bp Feature: domain Description: L1 -EN Location: 1 0-439 bp Feature: domain Description: xth Location: 610-769 bp Feature: domain Description: xth Location: 61 0-769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1807-2077 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 807-2077 bp Feature: gene Location: 2179-3285 bp Feature: gene Location: 3331-3732 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), xth (TIGR00633), RVT-GII

Seq: PULP01000069.1 Halobacteroidaceae bacterium isolate B1Sed10_43 B1-Sed10-C57325, whole genome shotgun sequence (2999 bp)
Overview 1 RT 1: 1-2998 bp Neighborhood of RT #1 [1, 2998] RVT-UNC Feature: gene Location: 1-966 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 136-877 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 136-877 bp Feature: gene Location: 970-2247 bp Feature: gene Location: 2666-2998 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27/RVT-GII/RVT-CRISPR(RVT-UNC)

Seq: PULP01000204.1 Halobacteroidaceae bacterium isolate B1Sed10_43 B1-Sed10-C7771, whole genome shotgun sequence (11391 bp)
Overview 1 RT 1: 3682-10997 bp Neighborhood of RT #1 [3682, 10997] RVT-UNC RNase_HI_RT_Ty3 Integrase_H2C2 rve PHD_PHRF1 Feature: gene Location: 3682-3912 bp Feature: gene Location: 4044-5402 bp Feature: gene Location: 5488-10101 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 7039-7222 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 703 9-7222 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 7516-7873 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 7516-7873 bp Feature: domain Description: Integrase_H2C2 Location: 8509-8668 bp Feature: domain Description: Integrase_H2C2 Location: 8509-8668 bp Feature: domain Description: rve Location: 8725-9052 bp Feature: domain Description: rve Location: 8725-9052 bp Feature: domain Description: PHD_PHRF1 Location: 9640-9772 bp Feature: domain Description: PHD_PHRF1 Location: 9640-9772 bp Feature: gene Location: 10267-10506 bp Feature: gene Location: 10824-10997 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG3/RVT-GII/RVT-UG4/RVT-CRISPR(RVT-UNC), RNase_HI_RT_Ty3 (cd09274), Integrase_H2C2 (pfam17921), rve (pfam00665), PHD_PHRF1 (cd15536)