myRT

myRT report for GCA_003551405.1_ASM355140v1

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Seq: PUMO01000097.1 Mollicutes bacterium isolate B1Sed10_225 B1-Sed10-C10419, whole genome shotgun sequence (9489 bp)
Overview 1 RT 1: 3-7956 bp Neighborhood of RT #1 [3, 9119] L1-EN RVT-GII Zf_RING Rnase_HI_RT_non_LTR Feature: gene Location: 3-9119 bp Feature: domain Description: L1-EN Location: 243-975 bp Feature: domain Description: L1 -EN Location: 243-975 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2256-2931 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2256-2931 bp Feature: domain Description: Zf_RING Location: 5934-6072 bp Feature: domain Description: Zf_RING Location: 5934-6072 bp Feature: domain Description: Rnase_HI_RT_non_LTR Location: 7551-7956 bp Feature: domain Description: Rnase_HI_RT_non_LTR Location: 7551 -7956 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-GII, Zf_RING (pfam16744), Rnase_HI_RT_non_LTR (cd09276)

Seq: PUMO01000133.1 Mollicutes bacterium isolate B1Sed10_225 B1-Sed10-C15314, whole genome shotgun sequence (7411 bp)
Overview 1 RT 1: 2-7053 bp Neighborhood of RT #1 [2, 7409] RVT-UG17 RNase_HI_RT_Ty3 Integrase_H2C2 rve PHD_RSF1 Feature: gene Location: 2-829 bp Feature: gene Location: 1118-2509 bp Feature: gene Location: 3594-7409 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 4422-4575 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 442 2 -4575 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 4869-5220 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 4869-52 2 0 bp Feature: domain Description: Integrase_H2C2 Location: 5793-5943 bp Feature: domain Description: Integrase_H2 C2 Location: 5793-5943 bp Feature: domain Description: rve Location: 6003-6333 bp Feature: domain Description: rve Location: 6003-6333 bp Feature: domain Description: PHD_RSF1 Location: 6915-7053 bp Feature: domain Description: PHD_RSF1 Location: 6915-7053 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, RNase_HI_RT_Ty3 (cd09274), Integrase_H2C2 (pfam17921), rve (pfam00665), PHD_RSF1 (cd15543)

Seq: PUMO01000218.1 Mollicutes bacterium isolate B1Sed10_225 B1-Sed10-C18528, whole genome shotgun sequence (6553 bp)
Overview 1 RT 1: 155-6551 bp Neighborhood of RT #1 [155, 6551] retropepsin_like RVT-UNC RNase_HI_RT_Ty3 Integrase_H2C2 rve PHD_RSF1 Feature: gene Location: 155-5482 bp Feature: domain Description: retropepsin_like Location: 1019-1289 bp Feature: domain Description: retropepsin_like Location: 1019-1289 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2492-2642 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2492-2642 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 2936-3293 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 293 6-3 293 bp Feature: domain Description: Integrase_H2C2 Location: 3866-4019 bp Feature: domain Description: Integrase_H2C2 Location: 3 866-4019 bp Feature: domain Description: rve Location: 4076-4403 bp Feature: domain Description: rve Location: 4076-4403 bp Feature: domain Description: PHD_RSF1 Location: 4988-5126 bp Feature: domain Description: PHD_RSF1 Location: 4988-5126 bp Feature: gene Location: 5344-5472 bp Feature: gene Location: 5553-6551 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT retropepsin_like (cd00303), RVT-UG17/RVT-UG4/RVT-GII/RVT-UG26(RVT-UNC), RNase_HI_RT_Ty3 (cd09274), Integrase_H2C2 (pfam17921), rve (pfam00665), PHD_RSF1 (cd15543)

Seq: PUMO01000069.1 Mollicutes bacterium isolate B1Sed10_225 B1-Sed10-C33656, whole genome shotgun sequence (4374 bp)
Overview 1 RT 1: 2-4252 bp Neighborhood of RT #1 [2, 4252] RVP_2 RVT-UG11 RNase_HI_RT_Ty3 Integrase_H2C2 rve CD_CSD Feature: gene Location: 2-3520 bp Feature: domain Description: RVP_2 Location: 26-206 bp Feature: domain Description: RVP_2 Location: 26-206 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 944-1091 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 94 4 -1091 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 1385-1727 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 1385-1727 bp Feature: domain Description: Integrase_H2C2 Location: 2162-2321 bp Feature: domain Description: Integrase_H2C2 Location: 2162-2321 bp Feature: domain Description: rve Location: 2378-2714 bp Feature: domain Description: rve Location: 2378-2714 bp Feature: domain Description: CD_CSD Location: 3311-3494 bp Feature: domain Description: CD_CSD Location: 3311-34 94 bp Feature: gene Location: 3986-4252 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVP_2 (pfam08284), RVT-UG11, RNase_HI_RT_Ty3 (cd09274), Integrase_H2C2 (pfam17921), rve (pfam00665), CD_CSD (cl28914)

Seq: PUMO01000020.1 Mollicutes bacterium isolate B1Sed10_225 B1-Sed10-C37048, whole genome shotgun sequence (4090 bp)
Overview 1 RT 1: 3-3751 bp Neighborhood of RT #1 [3, 3751] RVT-GII XthA Feature: gene Location: 3-2453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1272-1950 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1272-195 0 bp Feature: gene Location: 2601-3251 bp Feature: domain Description: XthA Location: 2625-3099 bp Feature: domain Description: XthA Location: 2625 -3099 bp Feature: gene Location: 3248-3751 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, XthA (COG0708)

Seq: PUMO01000006.1 Mollicutes bacterium isolate B1Sed10_225 B1-Sed10-C37325, whole genome shotgun sequence (4070 bp)
Overview 1 RT 1: 3-3628 bp Neighborhood of RT #1 [3, 4068] RVT-UG11 RNase_HI_RT_Ty3 retropepsin_like Retrotrans_gag Feature: gene Location: 3-1607 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 717-966 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 717-96 6 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 1296-1608 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 1296 -16 08 bp Feature: gene Location: 1565-2824 bp Feature: domain Description: retropepsin_like Location: 2567-2768 bp Feature: domain Description: retropepsin_like Location: 256 7-276 8 bp Feature: gene Location: 2323-4068 bp Feature: domain Description: Retrotrans_gag Location: 3340-3628 bp Feature: domain Description: Retrotrans_gag Location: 3340-36 28 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11, RNase_HI_RT_Ty3 (cd09274), retropepsin_like (cd00303), Retrotrans_gag (pfam03732)

Seq: PUMO01000060.1 Mollicutes bacterium isolate B1Sed10_225 B1-Sed10-C59561, whole genome shotgun sequence (2919 bp)
Overview 1 RT 1: 1-1516 bp Neighborhood of RT #1 [1, 2916] RVT-GII Feature: gene Location: 1-2916 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 832-1516 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 832-1516 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII