myRT

myRT report for GCA_003551755.1_ASM355175v1

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Seq: PUNL01000186.1 Methanosarcinaceae archaeon isolate B1Sed10_190R1 B1-Sed10-C25481, whole genome shotgun sequence (5284 bp)
Overview 1 RT 1: 1129-5274 bp Neighborhood of RT #1 [1129, 5282] RVT-GII GIIM RVT-GII GIIM COG4584 PRK06526 Feature: gene Location: 1129-1323 bp Feature: gene Location: 1533-1730 bp Feature: gene Location: 1851-2438 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1881-2052 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 881 -2052 bp Feature: domain Description: GIIM Note: maturase Location: 2133-2364 bp Feature: domain Description: GIIM Note: maturase Location: 21 33-2364 bp Feature: gene Location: 2491-3120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2566-2734 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2566-2734 bp Feature: domain Description: GIIM Note: maturase Location: 2815-3046 bp Feature: domain Description: GIIM Note: maturase Location: 281 5-3046 bp Feature: gene Location: 3327-4805 bp Feature: domain Description: COG4584 Location: 3330-4164 bp Feature: domain Description: COG4584 Location: 3330-41 64 bp Feature: gene Location: 4806-5282 bp Feature: domain Description: PRK06526 Location: 4833-5274 bp Feature: domain Description: PRK06526 Location: 4833-5274 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG4584 (Transposase ), PRK06526 (transposase; Provisional)

Seq: PUNL01000098.1 Methanosarcinaceae archaeon isolate B1Sed10_190R1 B1-Sed10-C44928, whole genome shotgun sequence (3563 bp)
Overview 1 RT 1: 3-2450 bp Neighborhood of RT #1 [3, 2515] RVT-GII Phage_int_SAM_5 Phage_int_SAM_5 INT_RitA_C_like INT_RitB_C_like Feature: gene Location: 3-140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-126 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-12 6 bp Feature: gene Location: 277-1488 bp Feature: domain Description: Phage_int_SAM_5 Location: 532-712 bp Feature: domain Description: Phage_int_SAM_5 Location: 532 -712 bp Feature: domain Description: Phage_int_SAM_5 Location: 751-868 bp Feature: domain Description: Phage_int_SAM_5 Location: 751-868 bp Feature: domain Description: INT_RitA_C_like Location: 934-1462 bp Feature: domain Description: INT_RitA_C_like Location: 934-1462 bp Feature: gene Location: 1526-2515 bp Feature: domain Description: INT_RitB_C_like Location: 1844-2450 bp Feature: domain Description: INT_RitB_C_like Location: 1844-2 450 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_RitB_C_like (cd00797), Phage_int_SAM_5 (pfam13102), INT_RitA_C_like (cd01188), RVT-GII