myRT

myRT report for GCA_003551845.1_ASM355184v1

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Seq: PUNQ01000045.1 Candidatus Nealsonbacteria bacterium isolate B1Sed10_182 B1-Sed10-C19411, whole genome shotgun sequence (6352 bp)
Overview 1 RT 1: 1-5555 bp Neighborhood of RT #1 [1, 6052] rve RNase_HI_RT_Ty3 Integrase_H2C2 retropepsin_like RVT-UNC Retrotrans_gag Feature: gene Location: 1-765 bp Feature: domain Description: rve Location: 7-271 bp Feature: domain Description: rve Location: 7-271 bp Feature: gene Location: 781-2082 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 1048-1390 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 1 048-1 390 bp Feature: domain Description: Integrase_H2C2 Location: 1816-1978 bp Feature: domain Description: Integrase_H2C2 Location: 1 81 6-1 978 bp Feature: gene Location: 2054-3832 bp Feature: domain Description: retropepsin_like Location: 2582-2828 bp Feature: domain Description: retropepsin_like Location: 2582-2828 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 3626-3773 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 3626-3773 bp Feature: gene Location: 3878-6052 bp Feature: domain Description: Retrotrans_gag Location: 5261-5555 bp Feature: domain Description: Retrotrans_gag Location: 5261 -5555 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rve (pfam00665), RNase_HI_RT_Ty3 (cd09274), Integrase_H2C2 (pfam17921), retropepsin_like (cd00303), RVT-UG26/RVT-UG4/RVT-UG25/RVT-UG11(RVT-UNC), Retrotrans_gag (pfam03732)

Seq: PUNQ01000020.1 Candidatus Nealsonbacteria bacterium isolate B1Sed10_182 B1-Sed10-C39816, whole genome shotgun sequence (3887 bp)
Overview 1 RT 1: 299-3479 bp Neighborhood of RT #1 [299, 3547] RVT-GII KOG2112 LPAM_2 Feature: gene Location: 299-1624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 602-1280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 602 -12 80 bp Feature: gene Location: 2229-2900 bp Feature: domain Description: KOG2112 Location: 2280-2895 bp Feature: domain Description: KOG2 112 Location: 2 2 80-2 895 bp Feature: gene Location: 3401-3547 bp Feature: domain Description: LPAM_2 Location: 3425-3479 bp Feature: domain Description: LPAM_2 Location: 342 5-3479 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, KOG2112 (KOG2112, Lysophospholipase ), LPAM_2 (pfam13627)