myRT

myRT report for GCA_003553765.1_ASM355376v1

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Seq: PWFF01000105.1 Bacteroidales bacterium isolate T1Sed10_53 T1-Sed10-C11978, whole genome shotgun sequence (7629 bp)
Overview 1 RT 1: 1716-7454 bp Neighborhood of RT #1 [1716, 7474] DEXSc_RecD-like recD_rel RVT-Retrons WYL Feature: gene Location: 1716-3923 bp Feature: domain Description: DEXSc_RecD-like Location: 1764-2292 bp Feature: domain Description: DEXSc_RecD-like Location: 1 764-2292 bp Feature: domain Description: recD_rel Location: 2973-3039 bp Feature: domain Description: recD_rel Location: 2973-3039 bp Feature: gene Location: 3979-4698 bp Feature: gene Location: 4702-5889 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4900-5503 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4900-5503 bp Feature: gene Location: 6464-7474 bp Feature: domain Description: WYL Location: 6935-7454 bp Feature: domain Description: WYL Location: 6935-7454 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEXSc_RecD-like (cd17933), recD_rel (TIGR01448), RVT-Retrons, WYL (pfam13280)

Seq: PWFF01000209.1 Bacteroidales bacterium isolate T1Sed10_53 T1-Sed10-C20877, whole genome shotgun sequence (5247 bp)
Overview 1 RT 1: 3-1275 bp Neighborhood of RT #1 [3, 1275] RVT-GII group_II_RT_mat Feature: gene Location: 3-512 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-42 6 bp Feature: gene Location: 585-812 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 612-774 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 612 -774 bp Feature: gene Location: 1072-1275 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416)

Seq: PWFF01000123.1 Bacteroidales bacterium isolate T1Sed10_53 T1-Sed10-C24970, whole genome shotgun sequence (4644 bp)
Overview 1 RT 1: 306-4394 bp Neighborhood of RT #1 [306, 4459] RVT-GII xerS INT_RitC_C_like INT_RitB_C_like Feature: gene Location: 306-671 bp Feature: gene Location: 1624-1827 bp Feature: gene Location: 1924-2421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2182-2404 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2182-2404 bp Feature: gene Location: 2521-3534 bp Feature: domain Description: xerS Location: 2551-2767 bp Feature: domain Description: xerS Location: 2551-2767 bp Feature: domain Description: INT_RitC_C_like Location: 2896-3439 bp Feature: domain Description: INT_RitC_C_like Location: 2896-3 43 9 bp Feature: gene Location: 3527-4459 bp Feature: domain Description: INT_RitB_C_like Location: 3788-4394 bp Feature: domain Description: INT_RitB_C_like Location: 3 788-43 94 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, xerS (PRK05084), INT_RitC_C_like (cd01182)

Seq: PWFF01000039.1 Bacteroidales bacterium isolate T1Sed10_53 T1-Sed10-C60365, whole genome shotgun sequence (2528 bp)
Overview 1 RT 1: 3-2525 bp Neighborhood of RT #1 [3, 2525] RVT-GII GIIM Feature: gene Location: 3-1220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 318-939 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 318-939 bp Feature: domain Description: GIIM Note: maturase Location: 987-1203 bp Feature: domain Description: GIIM Note: maturase Location: 987-1203 bp Feature: gene Location: 1105-1467 bp Feature: gene Location: 1752-2525 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PWFF01000087.1 Bacteroidales bacterium isolate T1Sed10_53 T1-Sed10-C8870, whole genome shotgun sequence (9250 bp)
Overview 1 RT 1: 3167-8393 bp Neighborhood of RT #1 [3167, 8398] Amidohydro_2 nylC_like RVT-GII GIIM LEU2 Feature: gene Location: 3167-4006 bp Feature: domain Description: Amidohydro_2 Location: 3365-3983 bp Feature: domain Description: Amidohydro_2 Location: 3365 -3983 bp Feature: gene Location: 4044-5006 bp Feature: domain Description: nylC_like Location: 4065-4950 bp Feature: domain Description: nylC_like Location: 4065 -495 0 bp Feature: gene Location: 5525-6907 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5870-6524 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 870-65 24 bp Feature: domain Description: GIIM Note: maturase Location: 6602-6812 bp Feature: domain Description: GIIM Note: maturase Location: 6602-6812 bp Feature: gene Location: 6711-7052 bp Feature: gene Location: 7124-8398 bp Feature: domain Description: LEU2 Location: 7148-8393 bp Feature: domain Description: LEU2 Location: 7148-8393 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Amidohydro_2 (pfam04909), nylC_like (cd02252), RVT-GII, GIIM (pfam08388), LEU2 (TIGR02083)