myRT

myRT report for GCA_003554225.1_ASM355422v1

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Seq: PWFW01000202.1 Halanaerobiaceae bacterium isolate T1Sed10_23 T1-Sed10-C15158, whole genome shotgun sequence (6523 bp)
Overview 1 RT 1: 64-6166 bp Neighborhood of RT #1 [64, 6522] retropepsin_like RVT-UNC RNase_HI_RT_Ty3 Integrase_H2C2 rve PHD_RSF1 Feature: gene Location: 64-6522 bp Feature: domain Description: retropepsin_like Location: 2059-2329 bp Feature: domain Description: retropepsin_like Location: 2059-2329 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 3532-3682 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 3532-3682 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 3976-4333 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 3976-4333 bp Feature: domain Description: Integrase_H2C2 Location: 4906-5059 bp Feature: domain Description: Integrase_H2C2 Location: 4906-5059 bp Feature: domain Description: rve Location: 5116-5443 bp Feature: domain Description: rve Location: 51 1 6-5443 bp Feature: domain Description: PHD_RSF1 Location: 6028-6166 bp Feature: domain Description: PHD_RSF1 Location: 6028-61 66 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT retropepsin_like (cd00303), RVT-UG17/RVT-UG4/RVT-GII(RVT-UNC), RNase_HI_RT_Ty3 (cd09274), Integrase_H2C2 (pfam17921), rve (pfam00665), PHD_RSF1 (cd15543)

Seq: PWFW01000015.1 Halanaerobiaceae bacterium isolate T1Sed10_23 T1-Sed10-C19154, whole genome shotgun sequence (5564 bp)
Overview 1 RT 1: 1-5442 bp Neighborhood of RT #1 [1, 5442] retropepsin_like RVT-UG11 RNase_HI_RT_Ty3 Integrase_H2C2 rve CD_CSD Feature: gene Location: 1-516 bp Feature: gene Location: 682-4710 bp Feature: domain Description: retropepsin_like Location: 1087-1336 bp Feature: domain Description: retropepsin_like Location: 1087-1336 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 2134-2281 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 2 134-2 2 81 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 2575-2917 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 2 575-2 917 bp Feature: domain Description: Integrase_H2C2 Location: 3352-3511 bp Feature: domain Description: Integrase_H2 C2 Location: 3352 -3511 bp Feature: domain Description: rve Location: 3568-3904 bp Feature: domain Description: rve Location: 3568-3904 bp Feature: domain Description: CD_CSD Location: 4501-4684 bp Feature: domain Description: CD_CSD Location: 4501-4684 bp Feature: gene Location: 5176-5442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT retropepsin_like (cd00303), RVT-UG11, RNase_HI_RT_Ty3 (cd09274), Integrase_H2C2 (pfam17921), rve (pfam00665), CD_CSD (cl28914)

Seq: PWFW01000270.1 Halanaerobiaceae bacterium isolate T1Sed10_23 T1-Sed10-C27938, whole genome shotgun sequence (4313 bp)
Overview 1 RT 1: 2-4310 bp Neighborhood of RT #1 [2, 4310] L1-EN RVT-UNC Feature: gene Location: 2-520 bp Feature: gene Location: 590-4132 bp Feature: domain Description: L1-EN Location: 611-1334 bp Feature: domain Description: L1-EN Location: 611-13 3 4 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2300-3026 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 23 00-3 026 bp Feature: gene Location: 4176-4310 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-UG11/RVT-GII/RVT-CRISPR(RVT-UNC)

Seq: PWFW01000163.1 Halanaerobiaceae bacterium isolate T1Sed10_23 T1-Sed10-C33355, whole genome shotgun sequence (3823 bp)
Overview 1 RT 1: 127-2609 bp Neighborhood of RT #1 [127, 3754] RVT-UNC L1-EN Feature: gene Location: 127-2136 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 361-1075 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 361-1075 bp Feature: gene Location: 2126-3754 bp Feature: domain Description: L1-EN Location: 2165-2609 bp Feature: domain Description: L1-EN Location: 2165-2609 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27/RVT-GII/RVT-CRISPR(RVT-UNC), L1-EN (cd09076)

Seq: PWFW01000087.1 Halanaerobiaceae bacterium isolate T1Sed10_23 T1-Sed10-C43510, whole genome shotgun sequence (3187 bp)
Overview 1 RT 1: 3-3180 bp Neighborhood of RT #1 [3, 3185] gag_pre-integrs rve RVT-UG11 RNase_HI_RT_Ty1 Feature: gene Location: 3-3185 bp Feature: domain Description: gag_pre-integrs Location: 570-729 bp Feature: domain Description: gag_pre-integrs Location: 5 70-729 bp Feature: domain Description: rve Location: 771-1119 bp Feature: domain Description: rve Location: 771-1119 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 2376-2493 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 2376-2493 bp Feature: domain Description: RNase_HI_RT_Ty1 Location: 2904-3180 bp Feature: domain Description: RNase_HI_RT_Ty1 Location: 2904-3180 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT gag_pre-integrs (pfam13976), rve (pfam00665), RVT-UG11, RNase_HI_RT_Ty1 (cd09272)