myRT

myRT report for GCA_003558025.1_ASM355802v1

Download annotations/find similar RTs

Seq: PWMY01000587.1 Puniceicoccaceae bacterium isolate CSSed10_295 CS-Sed10-C16336, whole genome shotgun sequence (10591 bp)
Overview 1 RT 1: 7894-10581 bp Neighborhood of RT #1 [7894, 10589] iduronate-2-sulfatase RVT-GII GIIM DppC Feature: gene Location: 7894-8127 bp Feature: gene Location: 8212-9240 bp Feature: domain Description: iduronate-2-sulfatase Location: 8269-9109 bp Feature: domain Description: iduronate-2-sulfatase Location: 8269-91 09 bp Feature: gene Location: 9358-9873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9397-9502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9397-9502 bp Feature: domain Description: GIIM Note: maturase Location: 9571-9754 bp Feature: domain Description: GIIM Note: maturase Location: 9571 -9754 bp Feature: gene Location: 9999-10589 bp Feature: domain Description: DppC Location: 10005-10581 bp Feature: domain Description: DppC Location: 1 0005-1 0581 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT iduronate-2-sulfatase (cd16030), RVT-GII, GIIM (pfam08388), DppC (COG1173)

Seq: PWMY01000468.1 Puniceicoccaceae bacterium isolate CSSed10_295 CS-Sed10-C163394, whole genome shotgun sequence (2639 bp)
Overview 1 RT 1: 2-2562 bp Neighborhood of RT #1 [2, 2636] P RVT-DGRs Avd_like HRDC Feature: gene Location: 2-226 bp Feature: domain Description: P Location: 29-173 bp Feature: domain Description: P Location: 2 9-173 bp Feature: gene Location: 741-1766 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 951-1551 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 951-1551 bp Feature: gene Location: 1763-2110 bp Feature: domain Description: Avd_like Location: 1796-2096 bp Feature: domain Description: Avd_like Location: 1796-2 096 bp Feature: gene Location: 2103-2636 bp Feature: domain Description: HRDC Location: 2370-2562 bp Feature: domain Description: HRDC Location: 2 370-2 562 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), HRDC (smart00341), P (PHA02535), RVT-DGRs