myRT

myRT report for GCA_003558535.1_ASM355853v1

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Seq: PWQN01000386.1 Bacterium isolate CSSed10_498R1 CS-Sed10-C101426, whole genome shotgun sequence (3556 bp)
Overview 1 RT 1: 1-2563 bp Neighborhood of RT #1 [1, 3318] Apolipoprotein RVT-UG19 Feature: gene Location: 1-708 bp Feature: gene Location: 701-1666 bp Feature: domain Description: Apolipoprotein Location: 902-1355 bp Feature: domain Description: Apolipoprotein Location: 902-1 355 bp Feature: gene Location: 1690-3318 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 2071-2563 bp Feature: RT Description: RVT-UG1 9 Note: UG1 9 RT Location: 2071 -2563 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Apolipoprotein (pfam01442), RVT-UG19

Seq: PWQN01000196.1 Bacterium isolate CSSed10_498R1 CS-Sed10-C49925, whole genome shotgun sequence (5498 bp)
Overview 1 RT 1: 228-4903 bp Neighborhood of RT #1 [228, 5496] RVT-Retrons COG3864 COG3864 MoxR Feature: gene Location: 228-905 bp Feature: gene Location: 1649-1780 bp Feature: gene Location: 1895-3151 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2393-2921 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 393-2 92 1 bp Feature: gene Location: 3164-4438 bp Feature: domain Description: COG3864 Location: 3224-3491 bp Feature: domain Description: COG3864 Location: 32 2 4-3491 bp Feature: domain Description: COG3864 Location: 3836-4403 bp Feature: domain Description: COG3864 Location: 3836-4403 bp Feature: gene Location: 4438-5496 bp Feature: domain Description: MoxR Location: 4516-4903 bp Feature: domain Description: MoxR Location: 4516-4903 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, COG3864 (Predicted metal-dependent peptidase ), MoxR (COG0714)

Seq: PWQN01000396.1 Bacterium isolate CSSed10_498R1 CS-Sed10-C59943, whole genome shotgun sequence (4916 bp)
Overview 1 RT 1: 2001-4636 bp Neighborhood of RT #1 [2001, 4860] pfam03781 Avd_like RVT-DGRs Feature: gene Location: 2001-3179 bp Feature: domain Description: pfam03781 Location: 2370-2691 bp Feature: domain Description: pfam03 781 Location: 23 70-2691 bp Feature: gene Location: 3198-3545 bp Feature: domain Description: Avd_like Location: 3231-3537 bp Feature: domain Description: Avd_like Location: 3 23 1-3 53 7 bp Feature: gene Location: 3559-4860 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4048-4636 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4048-463 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1), Avd_like (cd16376), RVT-DGRs

Seq: PWQN01000436.1 Bacterium isolate CSSed10_498R1 CS-Sed10-C96053, whole genome shotgun sequence (3680 bp)
Overview 1 RT 1: 1133-3680 bp Neighborhood of RT #1 [1133, 3679] ParB_N_like_MT RVT-GII Intron_maturas2 Feature: gene Location: 1133-1780 bp Feature: domain Description: ParB_N_like_MT Location: 1172-1421 bp Feature: domain Description: ParB_N_like_MT Location: 1172-14 21 bp Feature: gene Location: 2045-2173 bp Feature: gene Location: 2300-3679 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2567-3371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2567-3371 bp Feature: domain Description: Intron_maturas2 Location: 3446-3680 bp Feature: domain Description: Intron_maturas2 Location: 34 4 6-3680 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParB_N_like_MT (cd16844), RVT-GII, Intron_maturas2 (pfam01348)