myRT

myRT report for GCA_003561785.1_ASM356178v1

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Seq: PWVQ01000762.1 Myxococcales bacterium isolate CSSed11_303 CS-Sed11-C23482, whole genome shotgun sequence (6671 bp)
Overview 1 RT 1: 4600-6487 bp Neighborhood of RT #1 [4600, 6489] arc_metj Mtu_PIN_fam RVT-GII Feature: gene Location: 4600-4920 bp Feature: domain Description: arc_metj Location: 4672-4786 bp Feature: domain Description: arc_metj Location: 4672-4786 bp Feature: gene Location: 4917-5351 bp Feature: domain Description: Mtu_PIN_fam Location: 4920-5343 bp Feature: domain Description: Mtu_PIN_fam Location: 4920-5343 bp Feature: gene Location: 6154-6489 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6367-6487 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6367-6487 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT arc_metj (LOAD_arc_metj), Mtu_PIN_fam (TIGR00028), RVT-GII

Seq: PWVQ01000224.1 Myxococcales bacterium isolate CSSed11_303 CS-Sed11-C29839, whole genome shotgun sequence (5811 bp)
Overview 1 RT 1: 1-4525 bp Neighborhood of RT #1 [1, 4668] Y1_Tnp RVT-GII GIIM DUF772 DDE_Tnp_1_6 Feature: gene Location: 1-768 bp Feature: domain Description: Y1_Tnp Location: 40-364 bp Feature: domain Description: Y1_Tnp Location: 40-364 bp Feature: gene Location: 885-2207 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1167-1842 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1167-1842 bp Feature: domain Description: GIIM Note: maturase Location: 1917-2118 bp Feature: domain Description: GIIM Note: maturase Location: 1917-2 118 bp Feature: gene Location: 2373-2672 bp Feature: gene Location: 2812-4668 bp Feature: domain Description: DUF772 Location: 3055-3286 bp Feature: domain Description: DUF772 Location: 3055-32 86 bp Feature: domain Description: DDE_Tnp_1_6 Location: 4135-4525 bp Feature: domain Description: DDE_Tnp_1_6 Location: 4135-452 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Y1_Tnp (pfam01797), DUF772 (pfam05598), DDE_Tnp_1_6 (pfam13751), RVT-GII, GIIM (pfam08388)

Seq: PWVQ01000661.1 Myxococcales bacterium isolate CSSed11_303 CS-Sed11-C57343, whole genome shotgun sequence (3917 bp)
Overview 1 RT 1: 104-3284 bp Neighborhood of RT #1 [104, 3361] COG5421 RVT-GII GIIM Feature: gene Location: 104-1774 bp Feature: domain Description: COG5421 Location: 254-1562 bp Feature: domain Description: COG5421 Location: 254-1562 bp Feature: gene Location: 1964-3361 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2312-3005 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 12-3 005 bp Feature: domain Description: GIIM Note: maturase Location: 3065-3284 bp Feature: domain Description: GIIM Note: maturase Location: 3 065-3 284 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5421 (Transposase ), RVT-GII, GIIM (pfam08388)