myRT

myRT report for GCA_003561895.1_ASM356189v1

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Seq: PWXP01000103.1 Planctomycetaceae bacterium isolate CSSed11_97R1 CS-Sed11-C117732, whole genome shotgun sequence (2521 bp)
Overview 1 RT 1: 1-2504 bp Neighborhood of RT #1 [1, 2518] RVT-GII PQQ_2 PQQ_2 PQQ_3 Feature: gene Location: 1-936 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-556 bp Feature: gene Location: 1295-2518 bp Feature: domain Description: PQQ_2 Location: 1310-1514 bp Feature: domain Description: PQQ_2 Location: 1 31 0-1 51 4 bp Feature: domain Description: PQQ_2 Location: 1565-1706 bp Feature: domain Description: PQQ_2 Location: 1 565-1 706 bp Feature: domain Description: PQQ_3 Location: 2414-2504 bp Feature: domain Description: PQQ_3 Location: 241 4-2504 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PQQ_2 (pfam13360), PQQ_3 (pfam13570)

Seq: PWXP01000056.1 Planctomycetaceae bacterium isolate CSSed11_97R1 CS-Sed11-C17926, whole genome shotgun sequence (7777 bp)
Overview 1 RT 1: 2-1670 bp Neighborhood of RT #1 [2, 1670] KOG0192 RVT-GII zf-CHC2 Feature: gene Location: 2-1057 bp Feature: domain Description: KOG0192 Location: 5-386 bp Feature: domain Description: KOG0192 Location: 5-386 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 446-731 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 446-731 bp Feature: gene Location: 1208-1420 bp Feature: domain Description: zf-CHC2 Location: 1289-1415 bp Feature: domain Description: zf-CHC2 Location: 12 89-1415 bp Feature: gene Location: 1527-1670 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG0192 (KOG0192, Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs ), RVT-GII, zf-CHC2 (pfam01807)

Seq: PWXP01000592.1 Planctomycetaceae bacterium isolate CSSed11_97R1 CS-Sed11-C58069, whole genome shotgun sequence (3888 bp)
Overview 1 RT 1: 3-3586 bp Neighborhood of RT #1 [3, 3612] RVT-DGRs HRDC pfam00656 YfmG Feature: gene Location: 3-998 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 213-798 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 213 -798 bp Feature: gene Location: 973-1476 bp Feature: domain Description: HRDC Location: 1213-1411 bp Feature: domain Description: HRDC Location: 1213 -1411 bp Feature: gene Location: 1684-3612 bp Feature: domain Description: pfam00656 Location: 1879-2602 bp Feature: domain Description: pfam00656 Location: 1879-2602 bp Feature: domain Description: YfmG Location: 2752-3586 bp Feature: domain Description: YfmG Location: 2752-3 586 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, HRDC (smart00341), pfam00656 (Peptidase_C14;Caspase domain), YfmG (COG1262)

Seq: PWXP01000548.1 Planctomycetaceae bacterium isolate CSSed11_97R1 CS-Sed11-C6722, whole genome shotgun sequence (13296 bp)
Overview 1 RT 1: 134-4318 bp Neighborhood of RT #1 [134, 4395] RVT-GII prsA GH57N_TLGT_like DUF1925 DUF1926 Feature: gene Location: 134-724 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 581-707 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 581-707 bp Feature: gene Location: 864-2084 bp Feature: domain Description: prsA Location: 1158-2028 bp Feature: domain Description: prsA Location: 1158-2028 bp Feature: gene Location: 2224-4395 bp Feature: domain Description: GH57N_TLGT_like Location: 2242-3073 bp Feature: domain Description: GH57N_TLGT_like Location: 224 2-3073 bp Feature: domain Description: DUF1925 Location: 3163-3406 bp Feature: domain Description: DUF1925 Location: 3163-34 06 bp Feature: domain Description: DUF1926 Location: 3463-4318 bp Feature: domain Description: DUF1926 Location: 34 63-4 318 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, prsA (PRK04405), GH57N_TLGT_like (cd10793), DUF1925 (pfam09094), DUF1926 (pfam09095)

Seq: PWXP01000293.1 Planctomycetaceae bacterium isolate CSSed11_97R1 CS-Sed11-C73443, whole genome shotgun sequence (3378 bp)
Overview 1 RT 1: 2-1532 bp Neighborhood of RT #1 [2, 1537] RVT-CRISPR-like GIIM Fur rubredoxin_like rubredoxin_like Feature: gene Location: 2-562 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 38-200 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 38-200 bp Feature: domain Description: GIIM Note: maturase Location: 260-464 bp Feature: domain Description: GIIM Note: maturase Location: 260-464 bp Feature: gene Location: 856-1287 bp Feature: domain Description: Fur Location: 874-1276 bp Feature: domain Description: Fur Location: 874-1276 bp Feature: gene Location: 1292-1537 bp Feature: domain Description: rubredoxin_like Location: 1301-1379 bp Feature: domain Description: rubredoxin_like Location: 1301-1379 bp Feature: domain Description: rubredoxin_like Location: 1496-1532 bp Feature: domain Description: rubredoxin_like Location: 1496-15 32 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, GIIM (pfam08388), Fur (COG0735), rubredoxin_like (cl00202)

Seq: PWXP01000100.1 Planctomycetaceae bacterium isolate CSSed11_97R1 CS-Sed11-C97618, whole genome shotgun sequence (2834 bp)
Overview 1 RT 1: 758-2593 bp Neighborhood of RT #1 [758, 2613] RVT-GII group_II_RT_mat PIN_VapC4-5_FitB-like Feature: gene Location: 758-1588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1037-1562 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1037-156 2 bp Feature: gene Location: 1585-2145 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1591-1915 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1591-1915 bp Feature: gene Location: 2233-2613 bp Feature: domain Description: PIN_VapC4-5_FitB-like Location: 2242-2593 bp Feature: domain Description: PIN_VapC4-5_FitB-like Location: 2242-2593 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416), PIN_VapC4-5_FitB-like (cd18754)