myRT

myRT report for GCA_003562135.1_ASM356213v1

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Seq: PWWC01000331.1 Desulfobacteraceae bacterium isolate CSSed11_34 CS-Sed11-C12164, whole genome shotgun sequence (9674 bp)
Overview 1 RT 1: 7335-9374 bp Neighborhood of RT #1 [7335, 9374] RVT-GII Feature: gene Location: 7335-7811 bp Feature: gene Location: 7882-8145 bp Feature: gene Location: 8651-9004 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8654-8876 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8654-8876 bp Feature: gene Location: 9153-9374 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PWWC01000188.1 Desulfobacteraceae bacterium isolate CSSed11_34 CS-Sed11-C17092, whole genome shotgun sequence (7984 bp)
Overview 1 RT 1: 992-5751 bp Neighborhood of RT #1 [992, 5751] MTAN TPR_12 TPR TPR RVT-Retrons RVT-Retrons Feature: gene Location: 992-1150 bp Feature: gene Location: 1188-3476 bp Feature: domain Description: MTAN Location: 1299-1869 bp Feature: domain Description: MTAN Location: 12 99-1869 bp Feature: domain Description: TPR_12 Location: 2007-2193 bp Feature: domain Description: TPR_12 Location: 2 007-2 193 bp Feature: domain Description: TPR Location: 2634-2919 bp Feature: domain Description: TPR Location: 2 634-2 919 bp Feature: domain Description: TPR Location: 3111-3342 bp Feature: domain Description: TPR Location: 3111-3342 bp Feature: gene Location: 3491-4426 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3800-4154 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3800-4154 bp Feature: gene Location: 4027-4692 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4402-4618 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4402 -4618 bp Feature: gene Location: 4844-5254 bp Feature: gene Location: 5524-5751 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MTAN (cd09008), TPR_12 (pfam13424), TPR (smart00028), RVT-Retrons

Seq: PWWC01000057.1 Desulfobacteraceae bacterium isolate CSSed11_34 CS-Sed11-C6449, whole genome shotgun sequence (13591 bp)
Overview 1 RT 1: 1338-5731 bp Neighborhood of RT #1 [1338, 5787] TPR_14 tol_pal_ybgF tol_pal_ybgF tol_pal_ybgF MTAN RVT-Retrons RING-HC_RNF219 RING-HC_RNF219 RING-HC_RNF219 Feature: gene Location: 1338-3077 bp Feature: domain Description: TPR_14 Location: 1431-1518 bp Feature: domain Description: TPR_14 Location: 143 1-1518 bp Feature: domain Description: tol_pal_ybgF Location: 1836-2013 bp Feature: domain Description: tol_pal_ybgF Location: 183 6-2013 bp Feature: domain Description: tol_pal_ybgF Location: 2166-2400 bp Feature: domain Description: tol_pal_ybgF Location: 2166-2400 bp Feature: domain Description: tol_pal_ybgF Location: 2856-3057 bp Feature: domain Description: tol_pal_ybgF Location: 2856-3 057 bp Feature: gene Location: 3182-4006 bp Feature: domain Description: MTAN Location: 3293-3941 bp Feature: domain Description: MTAN Location: 3 293 -3 941 bp Feature: gene Location: 4021-5223 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4396-4951 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 43 96-4951 bp Feature: gene Location: 5209-5340 bp Feature: gene Location: 5377-5787 bp Feature: domain Description: RING-HC_RNF219 Location: 5473-5512 bp Feature: domain Description: RING-HC_RNF219 Location: 5473 -5512 bp Feature: domain Description: RING-HC_RNF219 Location: 5584-5644 bp Feature: domain Description: RING-HC_RNF219 Location: 5584-5644 bp Feature: domain Description: RING-HC_RNF219 Location: 5680-5731 bp Feature: domain Description: RING-HC_RNF219 Location: 5680-573 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TPR_14 (pfam13428), tol_pal_ybgF (TIGR02795), MTAN (cd09008), RVT-Retrons, RING-HC_RNF219 (cd16562)