myRT

myRT report for GCA_003562215.1_ASM356221v1

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Seq: PWVV01000717.1 Ardenticatenia bacterium isolate CSSed11_318R1 CS-Sed11-C64149, whole genome shotgun sequence (3620 bp)
Overview 1 RT 1: 180-2609 bp Neighborhood of RT #1 [180, 2653] RVT-CRISPR Cas1_I-II-III PRK04323 Feature: gene Location: 180-1070 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 426-1026 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 426-1 026 bp Feature: gene Location: 1242-2327 bp Feature: domain Description: Cas1_I-II-III Location: 1284-2292 bp Feature: domain Description: Cas1 _I-II-III Location: 1 284-2292 bp Feature: gene Location: 2399-2653 bp Feature: domain Description: PRK04323 Location: 2438-2609 bp Feature: domain Description: PRK04323 Location: 2438-2609 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas1_I-II-III (cl00656), PRK04323 (hypothetical protein; Provisional)

Seq: PWVV01000694.1 Ardenticatenia bacterium isolate CSSed11_318R1 CS-Sed11-C6630, whole genome shotgun sequence (13368 bp)
Overview 1 RT 1: 8739-13358 bp Neighborhood of RT #1 [8739, 13366] Acetyltransf_6 Acetyltransf_6 mycothiol_MshA RVT-Retrons PRK05431 Feature: gene Location: 8739-9749 bp Feature: domain Description: Acetyltransf_6 Location: 8769-8973 bp Feature: domain Description: Acetyltransf_6 Location: 8769-8973 bp Feature: domain Description: Acetyltransf_6 Location: 9258-9690 bp Feature: domain Description: Acetyltransf_6 Location: 92 58-9690 bp Feature: gene Location: 9753-11108 bp Feature: domain Description: mycothiol_MshA Location: 9849-11064 bp Feature: domain Description: mycothiol_MshA Location: 9849-11064 bp Feature: gene Location: 11118-12275 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11424-12048 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1142 4-12 048 bp Feature: gene Location: 12328-12471 bp Feature: gene Location: 12692-13366 bp Feature: domain Description: PRK05431 Location: 12698-13358 bp Feature: domain Description: PRK05431 Location: 12 698-13358 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_6 (pfam13480), mycothiol_MshA (TIGR03449), RVT-Retrons, PRK05431 (seryl-tRNA synthetase; Provisional)

Seq: PWVV01000028.1 Ardenticatenia bacterium isolate CSSed11_318R1 CS-Sed11-C8620, whole genome shotgun sequence (11655 bp)
Overview 1 RT 1: 1778-7762 bp Neighborhood of RT #1 [1778, 7762] RVT-GII GIIM HNHc RadC Feature: gene Location: 1778-3061 bp Feature: gene Location: 3073-4269 bp Feature: gene Location: 4463-6241 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4733-5420 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 473 3 -5420 bp Feature: domain Description: GIIM Note: maturase Location: 5486-5705 bp Feature: domain Description: GIIM Note: maturase Location: 5486-5705 bp Feature: domain Description: HNHc Note: nucleases Location: 6014-6128 bp Feature: domain Description: HNHc Note: nucleases Location: 6014-6128 bp Feature: gene Location: 6805-7395 bp Feature: domain Description: RadC Location: 6844-7372 bp Feature: domain Description: RadC Location: 6844-73 72 bp Feature: gene Location: 7580-7762 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507), RadC (pfam04002)