myRT

myRT report for GCA_003562415.1_ASM356241v1

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Seq: PWUY01000210.1 Anaerolineae bacterium isolate CSSed11_260 CS-Sed11-C112474, whole genome shotgun sequence (2594 bp)
Overview 1 RT 1: 3-2428 bp Neighborhood of RT #1 [3, 2428] PulG RVT-GII GIIM Feature: gene Location: 3-131 bp Feature: domain Description: PulG Location: 33-126 bp Feature: domain Description: PulG Location: 33-1 26 bp Feature: gene Location: 312-1700 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 714-1329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71 4-1 329 bp Feature: domain Description: GIIM Note: maturase Location: 1398-1626 bp Feature: domain Description: GIIM Note: maturase Location: 1 398-1 626 bp Feature: gene Location: 1781-2260 bp Feature: gene Location: 2270-2428 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PulG (pfam11773), RVT-GII, GIIM (pfam08388)

Seq: PWUY01000203.1 Anaerolineae bacterium isolate CSSed11_260 CS-Sed11-C39444, whole genome shotgun sequence (4919 bp)
Overview 1 RT 1: 50-4552 bp Neighborhood of RT #1 [50, 4749] COG5635 YfmG Avd_like RVT-DGRs Feature: gene Location: 50-2875 bp Feature: domain Description: COG5635 Location: 629-1808 bp Feature: domain Description: COG5635 Location: 62 9-1808 bp Feature: domain Description: YfmG Location: 1997-2861 bp Feature: domain Description: YfmG Location: 1997-2 861 bp Feature: gene Location: 3371-3712 bp Feature: domain Description: Avd_like Location: 3389-3701 bp Feature: domain Description: Avd_like Location: 3389-3701 bp Feature: gene Location: 3709-4749 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3904-4552 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3904-4552 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5635 (Predicted NTPase, NACHT family domain ), YfmG (COG1262), Avd_like (cd16376), RVT-DGRs

Seq: PWUY01000180.1 Anaerolineae bacterium isolate CSSed11_260 CS-Sed11-C66593, whole genome shotgun sequence (3584 bp)
Overview 1 RT 1: 3-2895 bp Neighborhood of RT #1 [3, 2933] SAVED RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Feature: gene Location: 3-542 bp Feature: domain Description: SAVED Location: 171-519 bp Feature: domain Description: SAVED Location: 171-519 bp Feature: gene Location: 584-1498 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 800-1388 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 800-13 88 bp Feature: gene Location: 1641-2639 bp Feature: domain Description: Cas1_I-II-III Location: 1650-2604 bp Feature: domain Description: Cas1_I-II-III Location: 1650-2604 bp Feature: gene Location: 2643-2933 bp Feature: domain Description: Cas2_I_II_III Location: 2664-2895 bp Feature: domain Description: Cas2_I_II_III Location: 2664-2895 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SAVED (pfam18145), RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)