myRT

myRT report for GCA_003562815.1_ASM356281v1

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Seq: PWTO01000057.1 Chromatiaceae bacterium isolate CSSed11_194 CS-Sed11-C34552, whole genome shotgun sequence (5326 bp)
Overview 1 RT 1: 2-4174 bp Neighborhood of RT #1 [2, 4230] PRK05456 RVT-GII GIIM HTH_17 Tra5 COG3547 Feature: gene Location: 2-172 bp Feature: domain Description: PRK05456 Location: 101-173 bp Feature: domain Description: PRK05456 Location: 1 01 -1 73 bp Feature: gene Location: 651-1943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 885-1542 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 885-1 542 bp Feature: domain Description: GIIM Note: maturase Location: 1620-1842 bp Feature: domain Description: GIIM Note: maturase Location: 1 620-1 842 bp Feature: gene Location: 2023-3087 bp Feature: domain Description: HTH_17 Location: 2104-2161 bp Feature: domain Description: HTH_1 7 Location: 21 04-21 61 bp Feature: domain Description: Tra5 Location: 2251-2926 bp Feature: domain Description: Tra5 Location: 2251 -2926 bp Feature: gene Location: 3193-4230 bp Feature: domain Description: COG3547 Location: 3205-4174 bp Feature: domain Description: COG3547 Location: 3205-41 74 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_17 (pfam12728), Tra5 (COG2801), COG3547 (Transposase ), RVT-GII, GIIM (pfam08388)