myRT

myRT report for GCA_003563235.1_ASM356323v1

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Seq: PWSM01000715.1 Planctomycetaceae bacterium isolate CSSed11_145 CS-Sed11-C110012, whole genome shotgun sequence (2630 bp)
Overview 1 RT 1: 2-2589 bp Neighborhood of RT #1 [2, 2627] RVT-DGRs YfmG Feature: gene Location: 2-394 bp Feature: gene Location: 417-575 bp Feature: gene Location: 744-1064 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 750-987 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 750-987 bp Feature: gene Location: 1104-2627 bp Feature: domain Description: YfmG Location: 1839-2589 bp Feature: domain Description: YfmG Location: 1 839-2589 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, YfmG (COG1262)

Seq: PWSM01001007.1 Planctomycetaceae bacterium isolate CSSed11_145 CS-Sed11-C24475, whole genome shotgun sequence (6515 bp)
Overview 1 RT 1: 2985-5353 bp Neighborhood of RT #1 [2985, 5353] DUF5372 RVT-GII GIIM MazF Feature: gene Location: 2985-3239 bp Feature: gene Location: 3243-3446 bp Feature: domain Description: DUF5372 Location: 3249-3414 bp Feature: domain Description: DUF5372 Location: 32 49-3414 bp Feature: gene Location: 3563-4381 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3569-3926 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3569-392 6 bp Feature: domain Description: GIIM Note: maturase Location: 3977-4196 bp Feature: domain Description: GIIM Note: maturase Location: 3977-4196 bp Feature: gene Location: 4470-4787 bp Feature: domain Description: MazF Location: 4482-4782 bp Feature: domain Description: MazF Location: 4482 -4782 bp Feature: gene Location: 5150-5353 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5372 (pfam17342), RVT-GII, GIIM (pfam08388), MazF (COG2337)

Seq: PWSM01000068.1 Planctomycetaceae bacterium isolate CSSed11_145 CS-Sed11-C3721, whole genome shotgun sequence (17840 bp)
Overview 1 RT 1: 1-2992 bp Neighborhood of RT #1 [1, 2992] Uma2 RVT-GII GIIM Feature: gene Location: 1-162 bp Feature: domain Description: Uma2 Location: 7-148 bp Feature: domain Description: Uma2 Location: 7-148 bp Feature: gene Location: 831-2243 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1173-1788 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1173 -1788 bp Feature: domain Description: GIIM Note: maturase Location: 1839-2058 bp Feature: domain Description: GIIM Note: maturase Location: 183 9-2058 bp Feature: gene Location: 2346-2819 bp Feature: gene Location: 2846-2992 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Uma2 (pfam05685), RVT-GII, GIIM (pfam08388)

Seq: PWSM01000232.1 Planctomycetaceae bacterium isolate CSSed11_145 CS-Sed11-C426, whole genome shotgun sequence (45830 bp)
Overview 1 RT 1: 1425-8055 bp Neighborhood of RT #1 [1425, 8171] N6_Mtase RVT-UG4 MviM Feature: gene Location: 1425-4463 bp Feature: domain Description: N6_Mtase Location: 2349-3261 bp Feature: domain Description: N6_Mtase Location: 234 9-3261 bp Feature: gene Location: 4643-5125 bp Feature: gene Location: 5265-5885 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5274-5619 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5274 -5619 bp Feature: gene Location: 6186-6602 bp Feature: gene Location: 6915-8171 bp Feature: domain Description: MviM Location: 7023-8055 bp Feature: domain Description: MviM Location: 7023-8055 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), RVT-UG4, MviM (COG0673)

Seq: PWSM01000739.1 Planctomycetaceae bacterium isolate CSSed11_145 CS-Sed11-C5200, whole genome shotgun sequence (15173 bp)
Overview 1 RT 1: 12519-15172 bp Neighborhood of RT #1 [12519, 15172] RVT-GII Feature: gene Location: 12519-13082 bp Feature: gene Location: 13314-13457 bp Feature: gene Location: 13790-14119 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13793-13997 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13793-13997 bp Feature: gene Location: 14963-15172 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PWSM01000489.1 Planctomycetaceae bacterium isolate CSSed11_145 CS-Sed11-C54223, whole genome shotgun sequence (4055 bp)
Overview 1 RT 1: 2-897 bp Neighborhood of RT #1 [2, 897] RVT-GII DUF5372 Feature: gene Location: 2-202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17-203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17-203 bp Feature: gene Location: 226-513 bp Feature: domain Description: DUF5372 Location: 238-445 bp Feature: domain Description: DUF5372 Location: 238-445 bp Feature: gene Location: 544-897 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DUF5372 (pfam17342)

Seq: PWSM01000546.1 Planctomycetaceae bacterium isolate CSSed11_145 CS-Sed11-C855, whole genome shotgun sequence (34361 bp)
Overview 1 RT 1: 15721-21957 bp Neighborhood of RT #1 [15721, 21968] RVT-GII AbgT PTS_EIIA_2 Feature: gene Location: 15721-17634 bp Feature: gene Location: 17640-18857 bp Feature: gene Location: 18854-19624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19172-19616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1917 2-19616 bp Feature: gene Location: 19641-21233 bp Feature: domain Description: AbgT Location: 19710-21210 bp Feature: domain Description: AbgT Location: 197 10-21210 bp Feature: gene Location: 21516-21968 bp Feature: domain Description: PTS_EIIA_2 Location: 21534-21957 bp Feature: domain Description: PTS_EIIA_2 Location: 21534-21957 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, AbgT (COG2978), PTS_EIIA_2 (pfam00359)