myRT

myRT report for GCA_003563695.1_ASM356369v1

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Seq: PWUH01000021.1 Syntrophomonadaceae bacterium isolate CSSed11_224R2 CS-Sed11-C109068, whole genome shotgun sequence (2643 bp)
Overview 1 RT 1: 309-2637 bp Neighborhood of RT #1 [309, 2642] RVT-GII Feature: gene Location: 309-2129 bp Feature: gene Location: 2157-2642 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2412-2637 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241 2-2637 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PWUH01000212.1 Syntrophomonadaceae bacterium isolate CSSed11_224R2 CS-Sed11-C17473, whole genome shotgun sequence (7884 bp)
Overview 1 RT 1: 211-4684 bp Neighborhood of RT #1 [211, 4737] RVT-GII LldP FieF Feature: gene Location: 211-372 bp Feature: gene Location: 457-1869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 796-1486 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 796-1486 bp Feature: gene Location: 2142-3833 bp Feature: domain Description: LldP Location: 2172-3816 bp Feature: domain Description: LldP Location: 2 172 -3816 bp Feature: gene Location: 4054-4737 bp Feature: domain Description: FieF Location: 4072-4684 bp Feature: domain Description: FieF Location: 4072 -4684 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LldP (COG1620), FieF (COG0053), RVT-GII

Seq: PWUH01000133.1 Syntrophomonadaceae bacterium isolate CSSed11_224R2 CS-Sed11-C37620, whole genome shotgun sequence (5064 bp)
Overview 1 RT 1: 581-5064 bp Neighborhood of RT #1 [581, 5063] prfC RVT-GII Feature: gene Location: 581-1921 bp Feature: gene Location: 2206-3789 bp Feature: domain Description: prfC Location: 2230-3763 bp Feature: domain Description: prfC Location: 223 0-3 763 bp Feature: gene Location: 4344-5063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4548-5064 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4548-5064 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT prfC (TIGR00503), RVT-GII

Seq: PWUH01000068.1 Syntrophomonadaceae bacterium isolate CSSed11_224R2 CS-Sed11-C53713, whole genome shotgun sequence (4080 bp)
Overview 1 RT 1: 480-3787 bp Neighborhood of RT #1 [480, 3787] Transposase_mut RVT-GII GIIM Feature: gene Location: 480-1940 bp Feature: domain Description: Transposase_mut Location: 768-1818 bp Feature: domain Description: Transposase_mut Location: 768-1818 bp Feature: gene Location: 2047-3348 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2302-2995 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2302-2995 bp Feature: domain Description: GIIM Note: maturase Location: 3076-3280 bp Feature: domain Description: GIIM Note: maturase Location: 3076-3280 bp Feature: gene Location: 3287-3568 bp Feature: gene Location: 3593-3787 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Transposase_mut (pfam00872)

Seq: PWUH01000348.1 Syntrophomonadaceae bacterium isolate CSSed11_224R2 CS-Sed11-C63522, whole genome shotgun sequence (3687 bp)
Overview 1 RT 1: 3-3266 bp Neighborhood of RT #1 [3, 3298] RVT-GII GIIM CPBP Feature: gene Location: 3-314 bp Feature: gene Location: 738-944 bp Feature: gene Location: 1028-1837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1241-1820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1241-1820 bp Feature: gene Location: 1865-2311 bp Feature: domain Description: GIIM Note: maturase Location: 1910-2135 bp Feature: domain Description: GIIM Note: maturase Location: 1910-2135 bp Feature: gene Location: 2537-3298 bp Feature: domain Description: CPBP Location: 2942-3266 bp Feature: domain Description: CPBP Location: 2942-3266 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), CPBP

Seq: PWUH01000036.1 Syntrophomonadaceae bacterium isolate CSSed11_224R2 CS-Sed11-C64053, whole genome shotgun sequence (3669 bp)
Overview 1 RT 1: 21-3411 bp Neighborhood of RT #1 [21, 3488] PRK06242 NapF RVT-GII GIIM Feature: gene Location: 21-887 bp Feature: domain Description: PRK06242 Location: 81-324 bp Feature: domain Description: PRK06 242 Location: 81-324 bp Feature: domain Description: NapF Location: 621-819 bp Feature: domain Description: NapF Location: 6 21-819 bp Feature: gene Location: 1556-1762 bp Feature: gene Location: 2250-3488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2454-3111 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2454-3111 bp Feature: domain Description: GIIM Note: maturase Location: 3192-3411 bp Feature: domain Description: GIIM Note: maturase Location: 3192-3411 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06242 (flavodoxin; Provisional), NapF (COG1145), RVT-GII, GIIM (pfam08388)