myRT

myRT report for GCA_003563835.1_ASM356383v1

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Seq: PWTQ01000487.1 Saprospirales bacterium isolate CSSed11_198 CS-Sed11-C103155, whole genome shotgun sequence (2736 bp)
Overview 1 RT 1: 68-2141 bp Neighborhood of RT #1 [68, 2734] Exo_endo_phos_2 RVT-CRISPR-like Feature: gene Location: 68-2734 bp Feature: domain Description: Exo_endo_phos_2 Location: 200-524 bp Feature: domain Description: Exo_endo_phos_2 Location: 200-524 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1430-2141 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1 430-21 41 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Exo_endo_phos_2 (pfam14529), RVT-CRISPR

Seq: PWTQ01000495.1 Saprospirales bacterium isolate CSSed11_198 CS-Sed11-C104310, whole genome shotgun sequence (2717 bp)
Overview 1 RT 1: 58-2663 bp Neighborhood of RT #1 [58, 2663] RVT-GII Feature: gene Location: 58-2466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1117-1789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1117-1789 bp Feature: gene Location: 2517-2663 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PWTQ01000558.1 Saprospirales bacterium isolate CSSed11_198 CS-Sed11-C108656, whole genome shotgun sequence (2649 bp)
Overview 1 RT 1: 3-1896 bp Neighborhood of RT #1 [3, 2489] Exo_endo_phos_2 RVT-GII Feature: gene Location: 3-263 bp Feature: domain Description: Exo_endo_phos_2 Location: 24-219 bp Feature: domain Description: Exo_endo_phos_2 Location: 24-219 bp Feature: gene Location: 267-2489 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1230-1896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 123 0-1896 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Exo_endo_phos_2 (pfam14529), RVT-GII

Seq: PWTQ01000041.1 Saprospirales bacterium isolate CSSed11_198 CS-Sed11-C110528, whole genome shotgun sequence (2622 bp)
Overview 1 RT 1: 2-2618 bp Neighborhood of RT #1 [2, 2620] L1-EN RVT-CRISPR-like Feature: gene Location: 2-202 bp Feature: gene Location: 464-595 bp Feature: gene Location: 617-2620 bp Feature: domain Description: L1-EN Location: 824-1481 bp Feature: domain Description: L1-EN Location: 824 -14 81 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2375-2618 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2375-2618 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-CRISPR

Seq: PWTQ01000038.1 Saprospirales bacterium isolate CSSed11_198 CS-Sed11-C17489, whole genome shotgun sequence (7881 bp)
Overview 1 RT 1: 1-6579 bp Neighborhood of RT #1 [1, 6617] ZnMc_pappalysin_like RVT-GII GIIM Lpp MotB Feature: gene Location: 1-1029 bp Feature: domain Description: ZnMc_pappalysin_like Location: 223-958 bp Feature: domain Description: ZnMc_pappalysin_like Location: 223-95 8 bp Feature: gene Location: 1825-3171 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2104-2719 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2104-2719 bp Feature: domain Description: GIIM Note: maturase Location: 2764-2968 bp Feature: domain Description: GIIM Note: maturase Location: 2764-2968 bp Feature: gene Location: 4112-5623 bp Feature: gene Location: 5649-6617 bp Feature: domain Description: Lpp Location: 5673-5787 bp Feature: domain Description: Lpp Location: 5 673-5 787 bp Feature: domain Description: MotB Location: 5925-6579 bp Feature: domain Description: MotB Location: 5 925 -65 79 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ZnMc_pappalysin_like (cd04275), RVT-GII, GIIM (pfam08388), Lpp (COG4238), MotB (COG1360)

Seq: PWTQ01000275.1 Saprospirales bacterium isolate CSSed11_198 CS-Sed11-C24598, whole genome shotgun sequence (6491 bp)
Overview 1 RT 1: 691-5032 bp Neighborhood of RT #1 [691, 5032] COG2361 RVT-UG12 Feature: gene Location: 691-1023 bp Feature: domain Description: COG2361 Location: 694-1012 bp Feature: domain Description: COG236 1 Location: 6 94-1012 bp Feature: gene Location: 1158-2072 bp Feature: gene Location: 2078-3673 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 2450-2879 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 2450-2879 bp Feature: gene Location: 3730-4521 bp Feature: gene Location: 4655-5032 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2361 (Uncharacterized conserved protein, contains HEPN domain ), RVT-UG12