myRT

myRT report for GCA_003563915.1_ASM356391v1

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Seq: PWTE01000311.1 Nitriliruptoraceae bacterium isolate CSSed11_175R1 CS-Sed11-C40342, whole genome shotgun sequence (4850 bp)
Overview 1 RT 1: 303-3616 bp Neighborhood of RT #1 [303, 3702] RVT-GII GIIM RpoE Feature: gene Location: 303-455 bp Feature: gene Location: 591-1844 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 807-1467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 807-1 467 bp Feature: domain Description: GIIM Note: maturase Location: 1551-1758 bp Feature: domain Description: GIIM Note: maturase Location: 1 551 -1 758 bp Feature: gene Location: 2129-2701 bp Feature: gene Location: 3112-3702 bp Feature: domain Description: RpoE Location: 3124-3616 bp Feature: domain Description: RpoE Location: 31 24-361 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RpoE (COG3343), RVT-GII, GIIM (pfam08388)

Seq: PWTE01000303.1 Nitriliruptoraceae bacterium isolate CSSed11_175R1 CS-Sed11-C94639, whole genome shotgun sequence (2889 bp)
Overview 1 RT 1: 83-2816 bp Neighborhood of RT #1 [83, 2816] RVT-GII Intron_maturas2 HTH_28 Sigma70_r4_2 Feature: gene Location: 83-1876 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 344-1139 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 344-1139 bp Feature: domain Description: Intron_maturas2 Location: 1265-1481 bp Feature: domain Description: Intron_maturas2 Location: 12 65-1481 bp Feature: gene Location: 1830-2321 bp Feature: domain Description: HTH_28 Location: 1983-2088 bp Feature: domain Description: HTH_2 8 Location: 1983-2 088 bp Feature: domain Description: Sigma70_r4_2 Location: 2145-2205 bp Feature: domain Description: Sigma70_r4_2 Location: 2 145-2 2 05 bp Feature: gene Location: 2469-2816 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_28 (pfam13518), Sigma70_r4_2 (pfam08281), RVT-GII, Intron_maturas2 (pfam01348)