myRT

myRT report for GCA_003564185.1_ASM356418v1

Download annotations/find similar RTs

Seq: PXFS01000074.1 Flavobacteriaceae bacterium isolate T3Sed10_96 T3-Sed10-C33735, whole genome shotgun sequence (6335 bp)
Overview 1 RT 1: 25-3032 bp Neighborhood of RT #1 [25, 5551] L1-EN RVT-UNC Feature: gene Location: 25-240 bp Feature: gene Location: 361-753 bp Feature: gene Location: 746-5551 bp Feature: domain Description: L1-EN Location: 794-1580 bp Feature: domain Description: L1 -EN Location: 794-1 580 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2705-3032 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2705-3032 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-CRISPR/RVT-GII/RVT-DGRs(RVT-UNC)

Seq: PXFS01000165.1 Flavobacteriaceae bacterium isolate T3Sed10_96 T3-Sed10-C47627, whole genome shotgun sequence (5052 bp)
Overview 1 RT 1: 56-4879 bp Neighborhood of RT #1 [56, 4879] retropepsin_like RVT-UG11 RNase_HI_RT_Ty3 Integrase_H2C2 rve Feature: gene Location: 56-211 bp Feature: gene Location: 285-1586 bp Feature: gene Location: 1543-4707 bp Feature: domain Description: retropepsin_like Location: 1561-1837 bp Feature: domain Description: retropepsin_like Location: 1561-1837 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 2632-2758 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 2 632 -2 758 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 3082-3418 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 3082 -3418 bp Feature: domain Description: Integrase_H2C2 Location: 3706-3874 bp Feature: domain Description: Integrase_H2 C2 Location: 3706-3874 bp Feature: domain Description: rve Location: 3943-4267 bp Feature: domain Description: rve Location: 3943-42 67 bp Feature: gene Location: 4751-4879 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT retropepsin_like (cd00303), RVT-UG11, RNase_HI_RT_Ty3 (cd09274), Integrase_H2C2 (pfam17921), rve (pfam00665)