myRT

myRT report for GCA_003564325.1_ASM356432v1

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Seq: PXFT01000243.1 Planctomycetaceae bacterium isolate T3Sed10_97 T3-Sed10-C126988, whole genome shotgun sequence (2612 bp)
Overview 1 RT 1: 2-2432 bp Neighborhood of RT #1 [2, 2432] PRK08317 RVT-GII Feature: gene Location: 2-190 bp Feature: domain Description: PRK08317 Location: 8-188 bp Feature: domain Description: PRK0831 7 Location: 8-1 88 bp Feature: gene Location: 422-1720 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 677-1367 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 677-1 367 bp Feature: gene Location: 1659-2252 bp Feature: gene Location: 2259-2432 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08317 (hypothetical protein; Provisional), RVT-GII

Seq: PXFT01000372.1 Planctomycetaceae bacterium isolate T3Sed10_97 T3-Sed10-C31574, whole genome shotgun sequence (6625 bp)
Overview 1 RT 1: 605-6623 bp Neighborhood of RT #1 [605, 6623] PL-6 Beta_helix CBM_4_9 RocR RVT-GII GIIM Feature: gene Location: 605-2923 bp Feature: domain Description: PL-6 Location: 776-947 bp Feature: domain Description: PL-6 Location: 776-947 bp Feature: domain Description: Beta_helix Location: 1595-2099 bp Feature: domain Description: Beta_helix Location: 1595-2 099 bp Feature: domain Description: CBM_4_9 Location: 2471-2849 bp Feature: domain Description: CBM_4_9 Location: 2 471-2 849 bp Feature: gene Location: 3189-4118 bp Feature: domain Description: RocR Location: 3195-3819 bp Feature: domain Description: RocR Location: 3195-3819 bp Feature: gene Location: 4938-6242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5154-5781 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5154-5781 bp Feature: domain Description: GIIM Note: maturase Location: 5820-6024 bp Feature: domain Description: GIIM Note: maturase Location: 582 0-602 4 bp Feature: gene Location: 6423-6623 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PL-6 (cl19188), Beta_helix (pfam13229), CBM_4_9 (pfam02018), RocR (COG3829), RVT-GII, GIIM (pfam08388)

Seq: PXFT01000552.1 Planctomycetaceae bacterium isolate T3Sed10_97 T3-Sed10-C41929, whole genome shotgun sequence (5497 bp)
Overview 1 RT 1: 856-4979 bp Neighborhood of RT #1 [856, 4979] Cas2_I_II_III Cas_Cas1 RVT-CRISPR Cas6_III CRISPR_Cas6 Feature: gene Location: 856-1200 bp Feature: domain Description: Cas2_I_II_III Location: 880-1072 bp Feature: domain Description: Cas2_I_II_III Location: 880-1072 bp Feature: gene Location: 1197-2168 bp Feature: domain Description: Cas_Cas1 Location: 1218-2037 bp Feature: domain Description: Cas_Cas1 Location: 1218-203 7 bp Feature: gene Location: 2165-3016 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2369-2969 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 23 69-2969 bp Feature: gene Location: 3074-4018 bp Feature: domain Description: Cas6_III Location: 3137-3485 bp Feature: domain Description: Cas6_III Location: 3 13 7-3 485 bp Feature: domain Description: CRISPR_Cas6 Location: 3632-4001 bp Feature: domain Description: CRISPR_Cas6 Location: 3 63 2-4001 bp Feature: gene Location: 4440-4979 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), Cas_Cas1 (pfam01867), RVT-CRISPR, Cas6_III (cd09760), CRISPR_Cas6 (pfam10040)

Seq: PXFT01000574.1 Planctomycetaceae bacterium isolate T3Sed10_97 T3-Sed10-C9952, whole genome shotgun sequence (13487 bp)
Overview 1 RT 1: 134-4318 bp Neighborhood of RT #1 [134, 4395] RVT-GII prsA GH57N_TLGT_like DUF1925 DUF1926 Feature: gene Location: 134-724 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 581-707 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 581-707 bp Feature: gene Location: 864-2084 bp Feature: domain Description: prsA Location: 1158-2028 bp Feature: domain Description: prsA Location: 1158-2028 bp Feature: gene Location: 2224-4395 bp Feature: domain Description: GH57N_TLGT_like Location: 2242-3073 bp Feature: domain Description: GH57N_TLGT_like Location: 224 2-3073 bp Feature: domain Description: DUF1925 Location: 3163-3406 bp Feature: domain Description: DUF1925 Location: 3163-34 06 bp Feature: domain Description: DUF1926 Location: 3463-4318 bp Feature: domain Description: DUF1926 Location: 34 63-4 318 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, prsA (PRK04405), GH57N_TLGT_like (cd10793), DUF1925 (pfam09094), DUF1926 (pfam09095)