myRT

myRT report for GCA_003564955.1_ASM356495v1

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Seq: PXDV01000250.1 Desulfobacteraceae bacterium isolate T3Sed10_35 T3-Sed10-C10357, whole genome shotgun sequence (13170 bp)
Overview 1 RT 1: 2343-6736 bp Neighborhood of RT #1 [2343, 6792] TPR_14 tol_pal_ybgF tol_pal_ybgF tol_pal_ybgF MTAN RVT-Retrons RING-HC_RNF219 RING-HC_RNF219 RING-HC_RNF219 Feature: gene Location: 2343-4082 bp Feature: domain Description: TPR_14 Location: 2436-2523 bp Feature: domain Description: TPR_1 4 Location: 2436-2523 bp Feature: domain Description: tol_pal_ybgF Location: 2847-3018 bp Feature: domain Description: tol_pal_ybgF Location: 2847-301 8 bp Feature: domain Description: tol_pal_ybgF Location: 3171-3405 bp Feature: domain Description: tol_pal_ybgF Location: 31 71 -3405 bp Feature: domain Description: tol_pal_ybgF Location: 3861-4062 bp Feature: domain Description: tol_pal_ybgF Location: 3861 -4062 bp Feature: gene Location: 4187-4996 bp Feature: domain Description: MTAN Location: 4283-4931 bp Feature: domain Description: MTAN Location: 4283-4931 bp Feature: gene Location: 5026-6147 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5320-5875 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5320-5875 bp Feature: gene Location: 6214-6345 bp Feature: gene Location: 6382-6792 bp Feature: domain Description: RING-HC_RNF219 Location: 6478-6517 bp Feature: domain Description: RING-HC_RNF21 9 Location: 6478-651 7 bp Feature: domain Description: RING-HC_RNF219 Location: 6589-6652 bp Feature: domain Description: RING-HC_RNF21 9 Location: 6589-6652 bp Feature: domain Description: RING-HC_RNF219 Location: 6685-6736 bp Feature: domain Description: RING-HC_RNF21 9 Location: 6685-6736 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TPR_14 (pfam13428), tol_pal_ybgF (TIGR02795), MTAN (cd09008), RVT-Retrons, RING-HC_RNF219 (cd16562)

Seq: PXDV01000004.1 Desulfobacteraceae bacterium isolate T3Sed10_35 T3-Sed10-C8082, whole genome shotgun sequence (15191 bp)
Overview 1 RT 1: 6251-11010 bp Neighborhood of RT #1 [6251, 11010] RVT-Retrons RVT-Retrons MTAN TPR_12 TPR TPR Feature: gene Location: 6251-6478 bp Feature: gene Location: 6748-7158 bp Feature: gene Location: 7310-7975 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7685-7901 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7685-7901 bp Feature: gene Location: 8047-8511 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8050-8239 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8050-82 39 bp Feature: gene Location: 8526-10814 bp Feature: domain Description: MTAN Location: 8637-9207 bp Feature: domain Description: MTAN Location: 8637-92 07 bp Feature: domain Description: TPR_12 Location: 9345-9531 bp Feature: domain Description: TPR_12 Location: 9345-9531 bp Feature: domain Description: TPR Location: 9972-10257 bp Feature: domain Description: TPR Location: 9972 -102 57 bp Feature: domain Description: TPR Location: 10449-10680 bp Feature: domain Description: TPR Location: 10449-10680 bp Feature: gene Location: 10852-11010 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, MTAN (cd09008), TPR_12 (pfam13424), TPR (smart00028)