myRT

myRT report for GCA_003565215.1_ASM356521v1

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Seq: PXCU01000258.1 PVC group bacterium isolate T3Sed10_302 T3-Sed10-C102300, whole genome shotgun sequence (3022 bp)
Overview 1 RT 1: 59-3019 bp Neighborhood of RT #1 [59, 3019] RVT-GII Feature: gene Location: 59-346 bp Feature: gene Location: 1044-1394 bp Feature: gene Location: 1391-2884 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1805-2495 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 805-2495 bp Feature: gene Location: 2894-3019 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PXCU01000470.1 PVC group bacterium isolate T3Sed10_302 T3-Sed10-C104101, whole genome shotgun sequence (2986 bp)
Overview 1 RT 1: 1-2866 bp Neighborhood of RT #1 [1, 2866] RVT-Retrons Feature: gene Location: 1-264 bp Feature: gene Location: 398-2107 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 536-1172 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 536-1172 bp Feature: gene Location: 2369-2866 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: PXCU01000178.1 PVC group bacterium isolate T3Sed10_302 T3-Sed10-C126502, whole genome shotgun sequence (2618 bp)
Overview 1 RT 1: 245-2616 bp Neighborhood of RT #1 [245, 2616] RVT-GII GIIM Feature: gene Location: 245-1609 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 569-1184 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 569-1184 bp Feature: domain Description: GIIM Note: maturase Location: 1241-1445 bp Feature: domain Description: GIIM Note: maturase Location: 1241-1445 bp Feature: gene Location: 1640-1771 bp Feature: gene Location: 2242-2616 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PXCU01000250.1 PVC group bacterium isolate T3Sed10_302 T3-Sed10-C128486, whole genome shotgun sequence (2591 bp)
Overview 1 RT 1: 156-2588 bp Neighborhood of RT #1 [156, 2588] RVT-DGRs Feature: gene Location: 156-1244 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 363-1005 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 363-1005 bp Feature: gene Location: 1298-1519 bp Feature: gene Location: 1728-2588 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: PXCU01000194.1 PVC group bacterium isolate T3Sed10_302 T3-Sed10-C134640, whole genome shotgun sequence (2511 bp)
Overview 1 RT 1: 407-2510 bp Neighborhood of RT #1 [407, 2510] RVT-GII RVT-GII Feature: gene Location: 407-1393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1154-1385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 115 4-1385 bp Feature: gene Location: 1414-2211 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1417-1843 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1417-1843 bp Feature: gene Location: 2331-2510 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PXCU01000641.1 PVC group bacterium isolate T3Sed10_302 T3-Sed10-C49881, whole genome shotgun sequence (4903 bp)
Overview 1 RT 1: 1115-4623 bp Neighborhood of RT #1 [1115, 4673] RVT-GII GIIM YwqK Feature: gene Location: 1115-1363 bp Feature: gene Location: 1720-1908 bp Feature: gene Location: 1899-3221 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2175-2844 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2175-2844 bp Feature: domain Description: GIIM Note: maturase Location: 2928-3132 bp Feature: domain Description: GIIM Note: maturase Location: 2928-3132 bp Feature: gene Location: 3203-4036 bp Feature: gene Location: 3972-4673 bp Feature: domain Description: YwqK Location: 4251-4623 bp Feature: domain Description: YwqK Location: 4251-46 23 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YwqK (COG2849)

Seq: PXCU01000405.1 PVC group bacterium isolate T3Sed10_302 T3-Sed10-C61520, whole genome shotgun sequence (4257 bp)
Overview 1 RT 1: 206-3897 bp Neighborhood of RT #1 [206, 3923] Mrr_cat RVT-GII GIIM RVT-GII ParE_toxin Feature: gene Location: 206-1234 bp Feature: domain Description: Mrr_cat Location: 257-500 bp Feature: domain Description: Mrr_cat Location: 257 -500 bp Feature: gene Location: 1406-1993 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1427-1628 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1427 -1628 bp Feature: domain Description: GIIM Note: maturase Location: 1715-1931 bp Feature: domain Description: GIIM Note: maturase Location: 17 15-1931 bp Feature: gene Location: 2123-3145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2750-3143 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27 50-3143 bp Feature: gene Location: 3153-3392 bp Feature: gene Location: 3618-3923 bp Feature: domain Description: ParE_toxin Location: 3645-3897 bp Feature: domain Description: ParE_toxin Location: 3645-3897 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Mrr_cat (pfam04471), ParE_toxin (pfam05016)

Seq: PXCU01000176.1 PVC group bacterium isolate T3Sed10_302 T3-Sed10-C61810, whole genome shotgun sequence (4244 bp)
Overview 1 RT 1: 2-4243 bp Neighborhood of RT #1 [2, 4243] Laminin_G_3 Laminin_G_3 RVT-GII GIIM Feature: gene Location: 2-571 bp Feature: gene Location: 634-2187 bp Feature: domain Description: Laminin_G_3 Location: 901-1414 bp Feature: domain Description: Laminin_G_3 Location: 901-1414 bp Feature: domain Description: Laminin_G_3 Location: 1681-2131 bp Feature: domain Description: Laminin_G_3 Location: 168 1-2131 bp Feature: gene Location: 2400-3752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2745-3408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2745-3408 bp Feature: domain Description: GIIM Note: maturase Location: 3486-3684 bp Feature: domain Description: GIIM Note: maturase Location: 348 6-368 4 bp Feature: gene Location: 3887-4243 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Laminin_G_3 (pfam13385)

Seq: PXCU01000636.1 PVC group bacterium isolate T3Sed10_302 T3-Sed10-C65763, whole genome shotgun sequence (4071 bp)
Overview 1 RT 1: 3-4057 bp Neighborhood of RT #1 [3, 4068] DUF1566 RVT-DGRs Avd_like CarboxypepD_reg CarboxypepD_reg DUF1566 Feature: gene Location: 3-479 bp Feature: domain Description: DUF1566 Location: 147-474 bp Feature: domain Description: DUF1566 Location: 147-474 bp Feature: gene Location: 476-2143 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 740-1466 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 740-1466 bp Feature: gene Location: 2365-2781 bp Feature: domain Description: Avd_like Location: 2416-2731 bp Feature: domain Description: Avd_like Location: 2416-2731 bp Feature: gene Location: 2809-4068 bp Feature: domain Description: CarboxypepD_reg Location: 2998-3169 bp Feature: domain Description: CarboxypepD_reg Location: 29 9 8-3169 bp Feature: domain Description: CarboxypepD_reg Location: 3310-3541 bp Feature: domain Description: CarboxypepD_reg Location: 3310-3541 bp Feature: domain Description: DUF1566 Location: 3604-4057 bp Feature: domain Description: DUF1566 Location: 3604-4057 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), CarboxypepD_reg (pfam13620), DUF1566 (pfam07603), RVT-DGRs

Seq: PXCU01000353.1 PVC group bacterium isolate T3Sed10_302 T3-Sed10-C70752, whole genome shotgun sequence (3869 bp)
Overview 1 RT 1: 1644-3676 bp Neighborhood of RT #1 [1644, 3867] MazE PRK09907 RVT-GII GIIM Feature: gene Location: 1644-1886 bp Feature: domain Description: MazE Location: 1647-1884 bp Feature: domain Description: MazE Location: 1647-1884 bp Feature: gene Location: 1886-2224 bp Feature: domain Description: PRK09907 Location: 1889-2216 bp Feature: domain Description: PRK09907 Location: 1889-2216 bp Feature: gene Location: 2329-3867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2794-3412 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2794-3412 bp Feature: domain Description: GIIM Note: maturase Location: 3454-3676 bp Feature: domain Description: GIIM Note: maturase Location: 3454-3676 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MazE (COG2336), PRK09907 (endoribonuclease MazF), RVT-GII, GIIM (pfam08388)