myRT

myRT report for GCA_003565615.1_ASM356561v1

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Seq: PXBE01000010.1 Bacterium isolate T3Sed10_235 T3-Sed10-C108788, whole genome shotgun sequence (2900 bp)
Overview 1 RT 1: 927-2896 bp Neighborhood of RT #1 [927, 2898] ParE RVT-GII RVT-GII Feature: gene Location: 927-1112 bp Feature: gene Location: 1223-1396 bp Feature: domain Description: ParE Location: 1226-1391 bp Feature: domain Description: ParE Location: 1 226-1 391 bp Feature: gene Location: 1648-2496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1654-2146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 654-21 46 bp Feature: gene Location: 2566-2898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2788-2896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2788-2896 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParE (COG3668), RVT-GII

Seq: PXBE01000004.1 Bacterium isolate T3Sed10_235 T3-Sed10-C62441, whole genome shotgun sequence (4215 bp)
Overview 1 RT 1: 3-4125 bp Neighborhood of RT #1 [3, 4214] Cas_Cas02710 CRISPR_Cas6 RVT-CRISPR COG4951 Feature: gene Location: 3-629 bp Feature: domain Description: Cas_Cas02710 Location: 21-552 bp Feature: domain Description: Cas_Cas02 710 Location: 2 1-552 bp Feature: gene Location: 746-1741 bp Feature: domain Description: CRISPR_Cas6 Location: 1355-1724 bp Feature: domain Description: CRISPR_Cas6 Location: 1355-172 4 bp Feature: gene Location: 1863-4214 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2079-2682 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2 079-2 682 bp Feature: domain Description: COG4951 Location: 3468-4125 bp Feature: domain Description: COG4951 Location: 3468-412 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas_Cas02710 (pfam09670), CRISPR_Cas6 (pfam10040), RVT-CRISPR, COG4951 (Uncharacterized protein )

Seq: PXBE01000017.1 Bacterium isolate T3Sed10_235 T3-Sed10-C70975, whole genome shotgun sequence (3862 bp)
Overview 1 RT 1: 2-3850 bp Neighborhood of RT #1 [2, 3861] RVT-GII GIIM HemolysinCabind T1SS_VCA0849 Feature: gene Location: 2-760 bp Feature: gene Location: 955-1284 bp Feature: gene Location: 1408-2814 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1750-2368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1750-23 68 bp Feature: domain Description: GIIM Note: maturase Location: 2419-2647 bp Feature: domain Description: GIIM Note: maturase Location: 2419-2647 bp Feature: gene Location: 3274-3861 bp Feature: domain Description: HemolysinCabind Location: 3406-3508 bp Feature: domain Description: HemolysinCabind Location: 3 406-3 508 bp Feature: domain Description: T1SS_VCA0849 Location: 3583-3850 bp Feature: domain Description: T1SS_VCA0849 Location: 3 583 -3 850 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HemolysinCabind (pfam00353), T1SS_VCA0849 (TIGR03661)