myRT

myRT report for GCA_003566995.1_ASM356699v1

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Seq: PXBG01000104.1 Syntrophobacteraceae bacterium isolate T3Sed10_239 T3-Sed10-C22407, whole genome shotgun sequence (8282 bp)
Overview 1 RT 1: 6349-8182 bp Neighborhood of RT #1 [6349, 8280] cysE RVT-GII GIIM Feature: gene Location: 6349-7335 bp Feature: domain Description: cysE Location: 6775-7264 bp Feature: domain Description: cysE Location: 6775-7264 bp Feature: gene Location: 6682-7482 bp Feature: gene Location: 7594-8280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7597-7900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7597-7900 bp Feature: domain Description: GIIM Note: maturase Location: 7975-8182 bp Feature: domain Description: GIIM Note: maturase Location: 7975-81 82 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT cysE (TIGR01172), RVT-GII, GIIM (pfam08388)

Seq: PXBG01000108.1 Syntrophobacteraceae bacterium isolate T3Sed10_239 T3-Sed10-C425, whole genome shotgun sequence (57677 bp)
Overview 1 RT 1: 3225-7819 bp Neighborhood of RT #1 [3225, 7881] RVT-Retrons MTAN TPR TPR TPR_6 TPR_6 TPR_6 Feature: gene Location: 3225-3461 bp Feature: gene Location: 3593-3964 bp Feature: gene Location: 4113-5321 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4494-5049 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4494-5049 bp Feature: gene Location: 5327-6154 bp Feature: domain Description: MTAN Location: 5444-6083 bp Feature: domain Description: MTAN Location: 5444-6083 bp Feature: gene Location: 6190-7881 bp Feature: domain Description: TPR Location: 6280-6427 bp Feature: domain Description: TPR Location: 62 80-642 7 bp Feature: domain Description: TPR Location: 6445-6748 bp Feature: domain Description: TPR Location: 6445-6748 bp Feature: domain Description: TPR_6 Location: 7132-7222 bp Feature: domain Description: TPR_6 Location: 7132 -72 2 2 bp Feature: domain Description: TPR_6 Location: 7636-7729 bp Feature: domain Description: TPR_6 Location: 7636-772 9 bp Feature: domain Description: TPR_6 Location: 7744-7819 bp Feature: domain Description: TPR_6 Location: 7744-7819 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, MTAN (cd09008), TPR (smart00028), TPR_6 (pfam13174)