myRT

myRT report for GCA_003567525.1_ASM356752v1

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Seq: PWZI01000302.1 Planctomycetaceae bacterium isolate T3Sed10_166R1 T3-Sed10-C28653, whole genome shotgun sequence (7058 bp)
Overview 1 RT 1: 2701-5069 bp Neighborhood of RT #1 [2701, 5069] DUF5372 RVT-GII GIIM MazF Feature: gene Location: 2701-2955 bp Feature: gene Location: 2959-3162 bp Feature: domain Description: DUF5372 Location: 2965-3130 bp Feature: domain Description: DUF5372 Location: 2965-31 30 bp Feature: gene Location: 3279-4097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3285-3642 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3285-3642 bp Feature: domain Description: GIIM Note: maturase Location: 3693-3912 bp Feature: domain Description: GIIM Note: maturase Location: 3693-391 2 bp Feature: gene Location: 4186-4503 bp Feature: domain Description: MazF Location: 4198-4498 bp Feature: domain Description: MazF Location: 41 98-4498 bp Feature: gene Location: 4866-5069 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5372 (pfam17342), RVT-GII, GIIM (pfam08388), MazF (COG2337)

Seq: PWZI01000515.1 Planctomycetaceae bacterium isolate T3Sed10_166R1 T3-Sed10-C3424, whole genome shotgun sequence (24078 bp)
Overview 1 RT 1: 10463-14654 bp Neighborhood of RT #1 [10463, 14791] PTS_EIIA_2 AbgT RVT-GII Kelch Feature: gene Location: 10463-10915 bp Feature: domain Description: PTS_EIIA_2 Location: 10481-10904 bp Feature: domain Description: PTS_EIIA_2 Location: 10481-10904 bp Feature: gene Location: 11198-12790 bp Feature: domain Description: AbgT Location: 11267-12767 bp Feature: domain Description: AbgT Location: 112 67-12 767 bp Feature: gene Location: 12807-13577 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13125-13569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1312 5-13569 bp Feature: gene Location: 13574-14122 bp Feature: gene Location: 14147-14791 bp Feature: domain Description: Kelch Location: 14609-14654 bp Feature: domain Description: Kelch Location: 14609-14654 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PTS_EIIA_2 (pfam00359), AbgT (COG2978), RVT-GII, Kelch (smart00612)

Seq: PWZI01000430.1 Planctomycetaceae bacterium isolate T3Sed10_166R1 T3-Sed10-C5918, whole genome shotgun sequence (17907 bp)
Overview 1 RT 1: 1087-7717 bp Neighborhood of RT #1 [1087, 7833] N6_Mtase RVT-UG4 MviM Feature: gene Location: 1087-4125 bp Feature: domain Description: N6_Mtase Location: 2011-2923 bp Feature: domain Description: N6_Mtase Location: 2011-2923 bp Feature: gene Location: 4305-4787 bp Feature: gene Location: 4927-5547 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4936-5281 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 493 6-5281 bp Feature: gene Location: 5848-6264 bp Feature: gene Location: 6577-7833 bp Feature: domain Description: MviM Location: 6685-7717 bp Feature: domain Description: MviM Location: 6685-7717 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), RVT-UG4, MviM (COG0673)