myRT

myRT report for GCA_003568225.1_ASM356822v1

Download annotations/find similar RTs

Seq: PWYY01000545.1 Gammaproteobacteria bacterium isolate T3Sed10_154 T3-Sed10-C11983, whole genome shotgun sequence (12131 bp)
Overview 1 RT 1: 7259-12127 bp Neighborhood of RT #1 [7259, 12129] PRK03612 PRK03612 RVT-GII group_II_RT_mat rpmE2 Feature: gene Location: 7259-7393 bp Feature: gene Location: 7591-9891 bp Feature: domain Description: PRK03612 Location: 7606-8185 bp Feature: domain Description: PRK0361 2 Location: 7606-81 85 bp Feature: domain Description: PRK03612 Location: 8287-9502 bp Feature: domain Description: PRK0361 2 Location: 8287-9502 bp Feature: gene Location: 9956-11050 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10241-10493 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0241 -1 0493 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 10502-10892 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1 0502-1 0892 bp Feature: gene Location: 11857-12129 bp Feature: domain Description: rpmE2 Location: 11893-12127 bp Feature: domain Description: rpmE2 Location: 1 1 893-1 21 27 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK03612 (polyamine aminopropyltransferase), RVT-GII, group_II_RT_mat (TIGR04416), rpmE2 (PRK01678)

Seq: PWYY01000675.1 Gammaproteobacteria bacterium isolate T3Sed10_154 T3-Sed10-C57895, whole genome shotgun sequence (4432 bp)
Overview 1 RT 1: 1594-4282 bp Neighborhood of RT #1 [1594, 4431] AcrR RVT-GII Feature: gene Location: 1594-2253 bp Feature: gene Location: 2770-3321 bp Feature: domain Description: AcrR Location: 2776-3259 bp Feature: domain Description: AcrR Location: 2 776-32 59 bp Feature: gene Location: 3409-4431 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3592-4282 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3592 -42 82 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcrR (COG1309), RVT-GII

Seq: PWYY01000466.1 Gammaproteobacteria bacterium isolate T3Sed10_154 T3-Sed10-C78000, whole genome shotgun sequence (3626 bp)
Overview 1 RT 1: 2-2609 bp Neighborhood of RT #1 [2, 2683] RVT-CRISPR Cas1_I-II-III CRISPR_Cas2 Feature: gene Location: 2-2398 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 482-1064 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 482-1064 bp Feature: domain Description: Cas1_I-II-III Location: 1418-2345 bp Feature: domain Description: Cas1_I-II-III Location: 1418-23 45 bp Feature: gene Location: 2408-2683 bp Feature: domain Description: CRISPR_Cas2 Location: 2411-2609 bp Feature: domain Description: CRISPR_Cas2 Location: 2411-2609 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas1_I-II-III (cl00656), CRISPR_Cas2 (pfam09827)