myRT

myRT report for GCA_003569855.1_ASM356985v1

Download annotations/find similar RTs

Seq: KZ984242.1 Klebsiella pneumoniae strain SWKP108 genomic scaffold Scaffold16, whole genome shotgun sequence (103498 bp)
Overview 1 RT 1: 32076-38929 bp Neighborhood of RT #1 [32076, 38946] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 32076-32741 bp Feature: domain Description: INT_P4_C Location: 32181-32739 bp Feature: domain Description: INT_P4_C Location: 321 81 -32739 bp Feature: gene Location: 33002-33442 bp Feature: domain Description: Integrase_1 Location: 33008-33224 bp Feature: domain Description: Integrase_1 Location: 33008-33224 bp Feature: gene Location: 33499-35577 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33907-34351 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33907-34351 bp Feature: gene Location: 35577-38186 bp Feature: domain Description: FimD Location: 35634-38175 bp Feature: domain Description: FimD Location: 35634-381 75 bp Feature: gene Location: 38218-38946 bp Feature: domain Description: FimC Location: 38266-38929 bp Feature: domain Description: FimC Location: 38266-38929 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: KZ984293.1 Klebsiella pneumoniae strain SWKP108 genomic scaffold Scaffold67, whole genome shotgun sequence (2205 bp)
Overview 1 RT 1: 212-1591 bp Neighborhood of RT #1 [212, 1983] RVT-GII Feature: gene Location: 212-445 bp Feature: gene Location: 496-1983 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 901-1591 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 901-1591 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII