myRT

myRT report for GCA_003572095.1_ASM357209v1

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Seq: QXIF01000207.1 Shigella dysenteriae strain DMB SH20200 MOD1-SH20200_207_length_5828_cov_16.976269, whole genome shotgun sequence (5828 bp)
Overview 1 RT 1: 150-2736 bp Neighborhood of RT #1 [150, 2750] DDE_Tnp_IS66 RVT-GII GIIM DDE_Tnp_IS66_C COG3547 Feature: gene Location: 150-281 bp Feature: domain Description: DDE_Tnp_IS66 Location: 162-255 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 62-255 bp Feature: gene Location: 759-1976 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 945-1599 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 945-1 599 bp Feature: domain Description: GIIM Note: maturase Location: 1677-1899 bp Feature: domain Description: GIIM Note: maturase Location: 1 677-1 899 bp Feature: gene Location: 2092-2238 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2104-2215 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 21 04-221 5 bp Feature: gene Location: 2265-2750 bp Feature: domain Description: COG3547 Location: 2283-2736 bp Feature: domain Description: COG3547 Location: 2283-2736 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), COG3547 (Transposase ), RVT-GII, GIIM (pfam08388)

Seq: QXIF01000425.1 Shigella dysenteriae strain DMB SH20200 MOD1-SH20200_425_length_794_cov_11.871448, whole genome shotgun sequence (794 bp)
Overview 1 RT 1: 63-681 bp Neighborhood of RT #1 [63, 710] RVT-GII Feature: gene Location: 63-710 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 363-681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 363-681 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII