myRT

myRT report for GCA_003572405.1_ASM357240v1

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Seq: QWSF01000273.1 Shigella boydii strain DMB SH131 MOD1-SH131_273_length_3619_cov_260.802469, whole genome shotgun sequence (3619 bp)
Overview 1 RT 1: 1481-3532 bp Neighborhood of RT #1 [1481, 3534] PAP2_acid_phosphatase Tra5 RVT-GII Feature: gene Location: 1481-2230 bp Feature: domain Description: PAP2_acid_phosphatase Location: 1556-2210 bp Feature: domain Description: PAP2_acid_phosphatase Location: 1 556-221 0 bp Feature: gene Location: 2605-2826 bp Feature: domain Description: Tra5 Location: 2617-2809 bp Feature: domain Description: Tra5 Location: 261 7-2809 bp Feature: gene Location: 2839-3534 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3139-3532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 39-3532 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PAP2_acid_phosphatase (cd03397), Tra5 (COG2801), RVT-GII

Seq: QWSF01000339.1 Shigella boydii strain DMB SH131 MOD1-SH131_339_length_1977_cov_111.522373, whole genome shotgun sequence (1977 bp)
Overview 1 RT 1: 47-1949 bp Neighborhood of RT #1 [47, 1975] RVT-GII GIIM DDE_Tnp_IS66 Feature: gene Location: 47-1180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 149-803 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 149-803 bp Feature: domain Description: GIIM Note: maturase Location: 881-1103 bp Feature: domain Description: GIIM Note: maturase Location: 881-1103 bp Feature: gene Location: 1275-1694 bp Feature: gene Location: 1742-1975 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1790-1949 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1790-1949 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388)