myRT

myRT report for GCA_003572415.1_ASM357241v1

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Seq: QWSB01000189.1 Shigella dysenteriae strain DMB SH127 MOD1-SH127_189_length_6208_cov_89.214042, whole genome shotgun sequence (6208 bp)
Overview 1 RT 1: 2852-5507 bp Neighborhood of RT #1 [2852, 5507] COG3547 RVT-GII GIIM Feature: gene Location: 2852-3337 bp Feature: domain Description: COG3547 Location: 2870-3323 bp Feature: domain Description: COG3547 Location: 2870-3323 bp Feature: gene Location: 3433-3600 bp Feature: gene Location: 3626-4759 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3728-4382 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3728-4382 bp Feature: domain Description: GIIM Note: maturase Location: 4460-4682 bp Feature: domain Description: GIIM Note: maturase Location: 4460-4682 bp Feature: gene Location: 4855-5274 bp Feature: gene Location: 5313-5507 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388)

Seq: QWSB01000191.1 Shigella dysenteriae strain DMB SH127 MOD1-SH127_191_length_6101_cov_70.645716, whole genome shotgun sequence (6101 bp)
Overview 1 RT 1: 208-5643 bp Neighborhood of RT #1 [208, 5645] PAP2_acid_phosphatase Tra5 RVT-GII RVT-GII GIIM ushA Feature: gene Location: 208-957 bp Feature: domain Description: PAP2_acid_phosphatase Location: 283-937 bp Feature: domain Description: PAP2 _acid_phosphatase Location: 2 83-937 bp Feature: gene Location: 1332-1553 bp Feature: domain Description: Tra5 Location: 1344-1536 bp Feature: domain Description: Tra5 Location: 1344-1536 bp Feature: gene Location: 1566-2693 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1866-2523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1866-2 52 3 bp Feature: gene Location: 2992-3519 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2998-3142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 998-3142 bp Feature: domain Description: GIIM Note: maturase Location: 3226-3442 bp Feature: domain Description: GIIM Note: maturase Location: 32 2 6-3442 bp Feature: gene Location: 3872-4114 bp Feature: gene Location: 4026-5645 bp Feature: domain Description: ushA Location: 4041-5643 bp Feature: domain Description: ushA Location: 4041-5643 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, PAP2_acid_phosphatase (cd03397), GIIM (pfam08388), ushA (PRK09558)