myRT

myRT report for GCA_003572625.1_ASM357262v1

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Seq: QWSC01000190.1 Shigella dysenteriae strain DMB SH128 MOD1-SH128_190_length_6320_cov_344.869274, whole genome shotgun sequence (6320 bp)
Overview 1 RT 1: 136-5571 bp Neighborhood of RT #1 [136, 5573] PAP2_acid_phosphatase Tra5 RVT-GII RVT-GII GIIM ushA Feature: gene Location: 136-885 bp Feature: domain Description: PAP2_acid_phosphatase Location: 211-865 bp Feature: domain Description: PAP2_acid_phosphatase Location: 21 1 -865 bp Feature: gene Location: 1260-1481 bp Feature: domain Description: Tra5 Location: 1272-1464 bp Feature: domain Description: Tra5 Location: 1 272-1 464 bp Feature: gene Location: 1494-2621 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1794-2451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 794-2451 bp Feature: gene Location: 2920-3447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2926-3070 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2926-3070 bp Feature: domain Description: GIIM Note: maturase Location: 3154-3370 bp Feature: domain Description: GIIM Note: maturase Location: 31 54-3370 bp Feature: gene Location: 3800-4042 bp Feature: gene Location: 3954-5573 bp Feature: domain Description: ushA Location: 3969-5571 bp Feature: domain Description: ushA Location: 3969-5571 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), PAP2_acid_phosphatase (cd03397), RVT-GII, GIIM (pfam08388), ushA (PRK09558)

Seq: QWSC01000308.1 Shigella dysenteriae strain DMB SH128 MOD1-SH128_308_length_1517_cov_254.969904, whole genome shotgun sequence (1517 bp)
Overview 1 RT 1: 3-1405 bp Neighborhood of RT #1 [3, 1405] RVT-GII Feature: gene Location: 3-890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 105-759 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 105-759 bp Feature: gene Location: 986-1405 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII