myRT

myRT report for GCA_003572645.1_ASM357264v1

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Seq: QWRR01000157.1 Shigella flexneri strain DMB SH107 MOD1-SH107_157_length_7664_cov_40.444474, whole genome shotgun sequence (7664 bp)
Overview 1 RT 1: 3-7213 bp Neighborhood of RT #1 [3, 7215] PHA02517 RVT-GII GIIM PHA02517 ESPR Peptidase_S6 autotrans_barl Feature: gene Location: 3-254 bp Feature: domain Description: PHA02517 Location: 6-189 bp Feature: domain Description: PHA0251 7 Location: 6-1 89 bp Feature: gene Location: 846-2369 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1119-1851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 1 9-1 851 bp Feature: domain Description: GIIM Note: maturase Location: 1926-2124 bp Feature: domain Description: GIIM Note: maturase Location: 1 926-21 24 bp Feature: gene Location: 2546-2932 bp Feature: domain Description: PHA02517 Location: 2549-2930 bp Feature: domain Description: PHA0251 7 Location: 2549-2930 bp Feature: gene Location: 3097-7215 bp Feature: domain Description: ESPR Location: 3100-3169 bp Feature: domain Description: ESPR Location: 31 00-31 69 bp Feature: domain Description: Peptidase_S6 Location: 3250-5422 bp Feature: domain Description: Peptidase_S6 Location: 3250-5422 bp Feature: domain Description: autotrans_barl Location: 5986-7213 bp Feature: domain Description: autotrans_barl Location: 5986-721 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), ESPR (pfam13018), Peptidase_S6 (pfam02395), autotrans_barl (TIGR01414), RVT-GII, GIIM (pfam08388)

Seq: QWRR01000224.1 Shigella flexneri strain DMB SH107 MOD1-SH107_224_length_2772_cov_72.220464, whole genome shotgun sequence (2772 bp)
Overview 1 RT 1: 210-2676 bp Neighborhood of RT #1 [210, 2750] PAP2_acid_phosphatase Tra5 RVT-GII GIIM Feature: gene Location: 210-959 bp Feature: domain Description: PAP2_acid_phosphatase Location: 285-939 bp Feature: domain Description: PAP2 _acid_phosphatase Location: 2 85-939 bp Feature: gene Location: 1355-1555 bp Feature: domain Description: Tra5 Location: 1364-1538 bp Feature: domain Description: Tra5 Location: 1364-1538 bp Feature: gene Location: 1568-2371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1868-2363 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1868-2 363 bp Feature: gene Location: 2424-2750 bp Feature: domain Description: GIIM Note: maturase Location: 2457-2676 bp Feature: domain Description: GIIM Note: maturase Location: 2 457-2 676 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, PAP2_acid_phosphatase (cd03397), GIIM (pfam08388)

Seq: QWRR01000267.1 Shigella flexneri strain DMB SH107 MOD1-SH107_267_length_1515_cov_29.425342, whole genome shotgun sequence (1515 bp)
Overview 1 RT 1: 626-1382 bp Neighborhood of RT #1 [626, 1513] RVT-GII Feature: gene Location: 626-1513 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 728-1382 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 728-13 82 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII