myRT

myRT report for GCA_003573225.1_ASM357322v1

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Seq: QWST01000224.1 Shigella flexneri strain DMB SH20030 MOD1-SH20030_224_length_6632_cov_20.632811, whole genome shotgun sequence (6632 bp)
Overview 1 RT 1: 3649-6519 bp Neighborhood of RT #1 [3649, 6539] GIIM RVT-GII Tra5 PAP2_acid_phosphatase Feature: gene Location: 3649-3828 bp Feature: gene Location: 3999-4325 bp Feature: domain Description: GIIM Note: maturase Location: 4032-4251 bp Feature: domain Description: GIIM Note: maturase Location: 4032-4251 bp Feature: gene Location: 4378-5181 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4678-5173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4678-51 73 bp Feature: gene Location: 5194-5394 bp Feature: domain Description: Tra5 Location: 5203-5377 bp Feature: domain Description: Tra5 Location: 5203-5377 bp Feature: gene Location: 5790-6539 bp Feature: domain Description: PAP2_acid_phosphatase Location: 5865-6519 bp Feature: domain Description: PAP2_acid_phosphatase Location: 5865-651 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), RVT-GII, Tra5 (COG2801), PAP2_acid_phosphatase (cd03397)

Seq: QWST01000551.1 Shigella flexneri strain DMB SH20030 MOD1-SH20030_551_length_1516_cov_20.787132, whole genome shotgun sequence (1516 bp)
Overview 1 RT 1: 3-1404 bp Neighborhood of RT #1 [3, 1404] RVT-GII Feature: gene Location: 3-890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 105-759 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 105-759 bp Feature: gene Location: 985-1404 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII