myRT

myRT report for GCA_003573235.1_ASM357323v1

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Seq: QWSL01000180.1 Shigella flexneri strain DMB SH20012 MOD1-SH20012_180_length_5576_cov_208.185293, whole genome shotgun sequence (5576 bp)
Overview 1 RT 1: 543-2492 bp Neighborhood of RT #1 [543, 2530] RVT-GII GIIM DDE_Tnp_IS66_C COG3547 Feature: gene Location: 543-1760 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 729-1383 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 729-1 383 bp Feature: domain Description: GIIM Note: maturase Location: 1461-1683 bp Feature: domain Description: GIIM Note: maturase Location: 1 461 -1 683 bp Feature: gene Location: 1876-2022 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1888-1999 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 888-1 999 bp Feature: gene Location: 2165-2530 bp Feature: domain Description: COG3547 Location: 2183-2492 bp Feature: domain Description: COG3547 Location: 21 83-2492 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66_C (pfam13817), COG3547 (Transposase ), RVT-GII, GIIM (pfam08388)

Seq: QWSL01000186.1 Shigella flexneri strain DMB SH20012 MOD1-SH20012_186_length_5332_cov_238.855410, whole genome shotgun sequence (5332 bp)
Overview 1 RT 1: 210-3288 bp Neighborhood of RT #1 [210, 3288] PAP2_acid_phosphatase Tra5 RVT-GII GIIM Feature: gene Location: 210-959 bp Feature: domain Description: PAP2_acid_phosphatase Location: 285-939 bp Feature: domain Description: PAP2 _acid_phosphatase Location: 2 85-939 bp Feature: gene Location: 1355-1555 bp Feature: domain Description: Tra5 Location: 1364-1538 bp Feature: domain Description: Tra5 Location: 1364-1538 bp Feature: gene Location: 1568-2371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1868-2363 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1868-2 363 bp Feature: gene Location: 2424-2750 bp Feature: domain Description: GIIM Note: maturase Location: 2457-2676 bp Feature: domain Description: GIIM Note: maturase Location: 2 457-2 676 bp Feature: gene Location: 3103-3288 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, PAP2_acid_phosphatase (cd03397), GIIM (pfam08388)